Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXC12P31275 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXC12P31275 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXC12P31275 AL161713.1-201ENST00000555538 145 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXC12P31275 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXC12P31275 AC006254.3-201ENST00000603353 884 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 AC021646.1-201ENST00000605469 484 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 AC012443.1-201ENST00000605605 231 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 AL022394.1-201ENST00000606979 292 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.82□□□□□ -1.64
HOXC12P31275 uc_338.11-201ENST00000619132 160 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC12P31275 AC068831.8-201ENST00000620171 435 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC12P31275 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC12P31275 AL672167.1-205ENST00000641112 3080 ntBASIC4.82□□□□□ -1.64
HOXC12P31275 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
HOXC12P31275 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXC12P31275 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
HOXC12P31275 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXC12P31275 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXC12P31275 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXC12P31275 AC004076.2-201ENST00000620532 3323 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC12P31275 AC104964.3-201ENST00000606115 2860 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 AC063976.2-201ENST00000425667 3556 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXC12P31275 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
HOXC12P31275 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC12P31275 RNA5SP305-201ENST00000362665 119 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 RNU6-960P-201ENST00000364056 120 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 Y_RNA.384-201ENST00000383909 102 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 RNU6-1227P-201ENST00000383981 107 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 Y_RNA.431-201ENST00000384086 102 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 SNORA5.1-201ENST00000384275 131 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 SNORA24.1-201ENST00000384401 135 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HOXC12P31275 AL359643.1-201ENST00000404109 423 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 RNU4-65P-201ENST00000410473 140 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXC12P31275 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXC12P31275 BEND7P1-201ENST00000422058 457 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXC12P31275 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXC12P31275 AC024082.2-201ENST00000434771 238 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 LINC02210-201ENST00000444561 288 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 AC105399.1-202ENST00000447303 205 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 FTH1P2-201ENST00000466086 412 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 AC006967.1-201ENST00000467608 589 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 RPL23AP11-201ENST00000475260 469 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXC12P31275 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC12P31275 Y_RNA.665-201ENST00000516177 98 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 RNU6-1038P-201ENST00000516516 104 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 RNU6-1092P-201ENST00000516955 87 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXC12P31275 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXC12P31275 HMGB1P40-201ENST00000525121 540 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 DEFB109D-201ENST00000529497 240 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXC12P31275 AL121821.2-201ENST00000556081 394 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXC12P31275 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXC12P31275 AC024619.4-201ENST00000580924 316 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 MIR4436B2-201ENST00000581415 91 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 MIR4436B1-201ENST00000583272 91 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXC12P31275 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXC12P31275 AC103710.3-201ENST00000608157 948 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 C2orf27A-204ENST00000623058 969 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 MIR6715B-201ENST00000637172 77 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXC12P31275 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HOXC12P31275 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXC12P31275 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
HOXC12P31275 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC12P31275 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC12P31275 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC12P31275 AC068870.1-201ENST00000563737 2455 ntBASIC4.81□□□□□ -1.64
HOXC12P31275 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXC12P31275 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC12P31275 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HOXC12P31275 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXC12P31275 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXC12P31275 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HOXC12P31275 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC12P31275 SNORD115-7-201ENST00000365306 82 ntBASIC4.8□□□□□ -1.64
HOXC12P31275 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXC12P31275 Y_RNA.394-201ENST00000383942 103 ntBASIC4.8□□□□□ -1.64
HOXC12P31275 CYB5AP4-201ENST00000396692 399 ntBASIC4.8□□□□□ -1.64
HOXC12P31275 HSPA8P15-201ENST00000401676 786 ntBASIC4.8□□□□□ -1.64
HOXC12P31275 AL354751.2-201ENST00000415471 210 ntBASIC4.8□□□□□ -1.64
HOXC12P31275 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXC12P31275 MTCO2P12-201ENST00000427426 682 ntBASIC4.8□□□□□ -1.64
HOXC12P31275 SAR1AP4-201ENST00000429225 591 ntBASIC4.8□□□□□ -1.64
HOXC12P31275 GSTM5P1-201ENST00000434751 660 ntBASIC4.8□□□□□ -1.64
HOXC12P31275 RPL36AP6-201ENST00000435770 321 ntBASIC4.8□□□□□ -1.64
HOXC12P31275 AC006466.1-201ENST00000438721 289 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms