Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SNORA31.8-201ENST00000516327 108 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 SNORA70.18-201ENST00000516696 98 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPN6P29350 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPN6P29350 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
PTPN6P29350 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPN6P29350 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.3□□□□□ -1.88
PTPN6P29350 EEF1B2P4-201ENST00000551398 348 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPN6P29350 LARP7P2-201ENST00000575306 125 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 AC008507.1-201ENST00000587506 734 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.3□□□□□ -1.88
PTPN6P29350 AC024257.5-201ENST00000612739 531 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 AC104763.3-201ENST00000613765 618 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 AC068831.7-201ENST00000616954 363 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 AC110801.1-201ENST00000623590 212 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPN6P29350 AL445984.1-201ENST00000637834 659 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTPN6P29350 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTPN6P29350 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTPN6P29350 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.3□□□□□ -1.88
PTPN6P29350 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PTPN6P29350 MAPK10-362ENST00000641864 4484 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PTPN6P29350 AL513302.2-201ENST00000562313 1842 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 FRG1CP-201ENST00000358464 769 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 RNA5SP119-201ENST00000362715 117 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 SNORD116-12-201ENST00000384468 92 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.29□□□□□ -1.88
PTPN6P29350 RNU2-15P-201ENST00000410692 191 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.29□□□□□ -1.88
PTPN6P29350 RPS7P13-201ENST00000413955 498 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 AL161449.1-201ENST00000414531 1199 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 GLRXP1-201ENST00000423261 334 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PTPN6P29350 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.29□□□□□ -1.88
PTPN6P29350 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.29□□□□□ -1.88
PTPN6P29350 CYCSP4-201ENST00000429682 331 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.29□□□□□ -1.88
PTPN6P29350 AC073387.1-201ENST00000453261 709 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 BTF3P5-201ENST00000457252 467 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 snoU109.3-201ENST00000459477 145 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.29□□□□□ -1.88
PTPN6P29350 AC006499.5-201ENST00000505037 514 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.29□□□□□ -1.88
PTPN6P29350 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.29□□□□□ -1.88
PTPN6P29350 RNU6-1225P-201ENST00000516336 65 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 SNORA70.19-201ENST00000516717 90 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.29□□□□□ -1.88
PTPN6P29350 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.29□□□□□ -1.88
PTPN6P29350 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.29□□□□□ -1.88
PTPN6P29350 AC021451.1-201ENST00000523498 1129 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.29□□□□□ -1.88
PTPN6P29350 AC125611.1-201ENST00000549563 229 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.29□□□□□ -1.88
PTPN6P29350 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.29□□□□□ -1.88
PTPN6P29350 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.29□□□□□ -1.88
PTPN6P29350 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PTPN6P29350 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.29□□□□□ -1.88
PTPN6P29350 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.29□□□□□ -1.88
PTPN6P29350 MTND3P13-201ENST00000574391 343 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.29□□□□□ -1.88
PTPN6P29350 BNIP3P24-201ENST00000593398 557 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 AC022146.1-201ENST00000595307 847 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 RPL23AP92-201ENST00000603609 255 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 AC010591.1-201ENST00000603941 649 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 AC084757.4-201ENST00000616350 526 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.29□□□□□ -1.88
PTPN6P29350 AC095031.1-201ENST00000623685 672 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 AC091925.2-201ENST00000625059 256 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 SNORA50A-202ENST00000629536 136 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 U6.101-201ENST00000637707 76 ntBASIC3.29□□□□□ -1.88
PTPN6P29350 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
PTPN6P29350 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PTPN6P29350 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PTPN6P29350 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PTPN6P29350 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PTPN6P29350 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PTPN6P29350 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PTPN6P29350 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.28□□□□□ -1.88
PTPN6P29350 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
PTPN6P29350 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PTPN6P29350 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PTPN6P29350 RNU1-75P-201ENST00000347264 129 ntBASIC3.28□□□□□ -1.88
PTPN6P29350 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PTPN6P29350 RNU6-1074P-201ENST00000383995 104 ntBASIC3.28□□□□□ -1.88
PTPN6P29350 RNU6-878P-201ENST00000384578 110 ntBASIC3.28□□□□□ -1.88
PTPN6P29350 MIR122-201ENST00000385044 85 ntBASIC3.28□□□□□ -1.88
PTPN6P29350 SNORA40.2-201ENST00000390847 128 ntBASIC3.28□□□□□ -1.88
PTPN6P29350 CYCSP45-201ENST00000402289 315 ntBASIC3.28□□□□□ -1.88
PTPN6P29350 SNORA11.1-201ENST00000408133 129 ntBASIC3.28□□□□□ -1.88
PTPN6P29350 AC109780.2-201ENST00000413467 845 ntBASIC3.28□□□□□ -1.88
PTPN6P29350 AC092447.6-201ENST00000414578 210 ntBASIC3.28□□□□□ -1.88
PTPN6P29350 RPS29P4-201ENST00000414733 161 ntBASIC3.28□□□□□ -1.88
PTPN6P29350 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.28□□□□□ -1.88
PTPN6P29350 RPL31P12-201ENST00000422587 358 ntBASIC3.28□□□□□ -1.88
PTPN6P29350 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.28□□□□□ -1.88
PTPN6P29350 AC012497.1-201ENST00000429392 575 ntBASIC3.28□□□□□ -1.88
PTPN6P29350 HMGN2P31-201ENST00000432430 273 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms