Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC034114.1-201ENST00000520293 285 ntBASIC6.04□□□□□ -1.44
VARSP26640 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.04□□□□□ -1.44
VARSP26640 DEFB108E-201ENST00000524692 240 ntBASIC6.04□□□□□ -1.44
VARSP26640 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.04□□□□□ -1.44
VARSP26640 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6.04□□□□□ -1.44
VARSP26640 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC6.04□□□□□ -1.44
VARSP26640 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.04□□□□□ -1.44
VARSP26640 AC004832.4-201ENST00000608952 331 ntBASIC6.04□□□□□ -1.44
VARSP26640 AC006023.2-201ENST00000609916 167 ntBASIC6.04□□□□□ -1.44
VARSP26640 MIR6862-1-201ENST00000613016 70 ntBASIC6.04□□□□□ -1.44
VARSP26640 MIR6862-2-201ENST00000614755 70 ntBASIC6.04□□□□□ -1.44
VARSP26640 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC6.04□□□□□ -1.44
VARSP26640 AC073869.10-201ENST00000642016 354 ntBASIC6.04□□□□□ -1.44
VARSP26640 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
VARSP26640 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VARSP26640 AC022325.1-201ENST00000502748 2199 ntBASIC6.04□□□□□ -1.44
VARSP26640 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VARSP26640 OR9K1P-202ENST00000641111 3217 ntBASIC6.04□□□□□ -1.44
VARSP26640 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
VARSP26640 HSPA8P1-201ENST00000425843 1833 ntBASIC6.04□□□□□ -1.44
VARSP26640 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.04□□□□□ -1.44
VARSP26640 AL731532.1-201ENST00000623972 4236 ntBASIC6.04□□□□□ -1.44
VARSP26640 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.03□□□□□ -1.44
VARSP26640 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VARSP26640 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
VARSP26640 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
VARSP26640 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
VARSP26640 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.03□□□□□ -1.44
VARSP26640 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VARSP26640 RNA5SP391-201ENST00000363456 119 ntBASIC6.03□□□□□ -1.44
VARSP26640 RNU6-596P-201ENST00000365395 98 ntBASIC6.03□□□□□ -1.44
VARSP26640 RNU6-1329P-201ENST00000365664 107 ntBASIC6.03□□□□□ -1.44
VARSP26640 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
VARSP26640 RNU6-130P-201ENST00000411112 103 ntBASIC6.03□□□□□ -1.44
VARSP26640 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.03□□□□□ -1.44
VARSP26640 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VARSP26640 AC069213.2-201ENST00000420238 366 ntBASIC6.03□□□□□ -1.44
VARSP26640 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VARSP26640 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VARSP26640 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC6.03□□□□□ -1.44
VARSP26640 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VARSP26640 RNU7-138P-201ENST00000459479 64 ntBASIC6.03□□□□□ -1.44
VARSP26640 RN7SL214P-201ENST00000487317 265 ntBASIC6.03□□□□□ -1.44
VARSP26640 Y_RNA.687-201ENST00000516558 91 ntBASIC6.03□□□□□ -1.44
VARSP26640 RNU6-347P-201ENST00000516658 105 ntBASIC6.03□□□□□ -1.44
VARSP26640 AC087441.2-201ENST00000529141 262 ntBASIC6.03□□□□□ -1.44
VARSP26640 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC6.03□□□□□ -1.44
VARSP26640 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.03□□□□□ -1.44
VARSP26640 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.03□□□□□ -1.44
VARSP26640 AC007448.1-201ENST00000582714 234 ntBASIC6.03□□□□□ -1.44
VARSP26640 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.03□□□□□ -1.44
VARSP26640 DLEU2_2.2-201ENST00000615474 90 ntBASIC6.03□□□□□ -1.44
VARSP26640 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.03□□□□□ -1.44
VARSP26640 TEX41-280ENST00000629185 591 ntTSL 5 BASIC6.03□□□□□ -1.44
VARSP26640 AC000095.2-202ENST00000637415 154 ntBASIC6.03□□□□□ -1.44
VARSP26640 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VARSP26640 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
VARSP26640 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.03□□□□□ -1.44
VARSP26640 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
VARSP26640 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.03□□□□□ -1.44
VARSP26640 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VARSP26640 IRF5P1-201ENST00000504852 2164 ntBASIC6.03□□□□□ -1.44
VARSP26640 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VARSP26640 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
VARSP26640 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VARSP26640 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.02□□□□□ -1.44
VARSP26640 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
VARSP26640 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.44
VARSP26640 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VARSP26640 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VARSP26640 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VARSP26640 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VARSP26640 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.02□□□□□ -1.45
VARSP26640 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VARSP26640 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VARSP26640 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.02□□□□□ -1.45
VARSP26640 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC6.02□□□□□ -1.45
VARSP26640 RNU1-130P-201ENST00000363930 160 ntBASIC6.02□□□□□ -1.45
VARSP26640 RNU6-1243P-201ENST00000364028 107 ntBASIC6.02□□□□□ -1.45
VARSP26640 GNG5P2-201ENST00000372054 207 ntBASIC6.02□□□□□ -1.45
VARSP26640 RNU6-701P-201ENST00000384059 107 ntBASIC6.02□□□□□ -1.45
VARSP26640 RNU6-790P-201ENST00000384479 105 ntBASIC6.02□□□□□ -1.45
VARSP26640 MIR628-201ENST00000385229 95 ntBASIC6.02□□□□□ -1.45
VARSP26640 RPL23AP17-201ENST00000401064 499 ntBASIC6.02□□□□□ -1.45
VARSP26640 AL121835.1-201ENST00000404250 354 ntBASIC6.02□□□□□ -1.45
VARSP26640 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.02□□□□□ -1.45
VARSP26640 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC6.02□□□□□ -1.45
VARSP26640 AL354868.1-201ENST00000417077 482 ntBASIC6.02□□□□□ -1.45
VARSP26640 RPS12P5-201ENST00000423449 371 ntBASIC6.02□□□□□ -1.45
VARSP26640 EIF1P2-201ENST00000428233 350 ntBASIC6.02□□□□□ -1.45
VARSP26640 AC094019.1-201ENST00000434678 472 ntBASIC6.02□□□□□ -1.45
VARSP26640 RPEP5-201ENST00000441137 268 ntBASIC6.02□□□□□ -1.45
VARSP26640 Z95327.1-201ENST00000446082 482 ntBASIC6.02□□□□□ -1.45
VARSP26640 RNU6-1218P-201ENST00000458990 108 ntBASIC6.02□□□□□ -1.45
VARSP26640 AC006511.1-201ENST00000470614 315 ntBASIC6.02□□□□□ -1.45
VARSP26640 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.02□□□□□ -1.45
VARSP26640 RN7SL326P-201ENST00000477493 296 ntBASIC6.02□□□□□ -1.45
VARSP26640 AC107393.1-201ENST00000512403 346 ntBASIC6.02□□□□□ -1.45
VARSP26640 IGKV2-23-201ENST00000518729 323 ntBASIC6.02□□□□□ -1.45
VARSP26640 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms