Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 CR381572.1-201ENST00000625098 102 ntBASIC5.71□□□□□ -1.5
LIG1P18858 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.71□□□□□ -1.5
LIG1P18858 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LIG1P18858 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.71□□□□□ -1.5
LIG1P18858 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.71□□□□□ -1.5
LIG1P18858 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LIG1P18858 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LIG1P18858 AC126323.6-202ENST00000568092 3511 ntBASIC5.7□□□□□ -1.5
LIG1P18858 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
LIG1P18858 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
LIG1P18858 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LIG1P18858 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LIG1P18858 AL161781.1-201ENST00000354277 403 ntBASIC5.7□□□□□ -1.5
LIG1P18858 Y_RNA.145-201ENST00000363527 102 ntBASIC5.7□□□□□ -1.5
LIG1P18858 RNA5SP455-201ENST00000365190 119 ntBASIC5.7□□□□□ -1.5
LIG1P18858 RNU6-996P-201ENST00000365438 107 ntBASIC5.7□□□□□ -1.5
LIG1P18858 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.7□□□□□ -1.5
LIG1P18858 PRELID3BP11-201ENST00000414230 479 ntBASIC5.7□□□□□ -1.5
LIG1P18858 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.7□□□□□ -1.5
LIG1P18858 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.7□□□□□ -1.5
LIG1P18858 DUTP6-201ENST00000425573 462 ntBASIC5.7□□□□□ -1.5
LIG1P18858 BRWD1P3-201ENST00000428816 390 ntBASIC5.7□□□□□ -1.5
LIG1P18858 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC5.7□□□□□ -1.5
LIG1P18858 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.7□□□□□ -1.5
LIG1P18858 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.7□□□□□ -1.5
LIG1P18858 AL591473.1-201ENST00000464297 313 ntBASIC5.7□□□□□ -1.5
LIG1P18858 RPL5P30-201ENST00000465511 891 ntBASIC5.7□□□□□ -1.5
LIG1P18858 AP000893.1-201ENST00000474462 794 ntBASIC5.7□□□□□ -1.5
LIG1P18858 RPL7AP6-201ENST00000477943 801 ntBASIC5.7□□□□□ -1.5
LIG1P18858 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.7□□□□□ -1.5
LIG1P18858 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.7□□□□□ -1.5
LIG1P18858 BTF3P13-201ENST00000513224 490 ntBASIC5.7□□□□□ -1.5
LIG1P18858 AC093677.1-201ENST00000514414 678 ntBASIC5.7□□□□□ -1.5
LIG1P18858 RNU6-410P-201ENST00000517006 107 ntBASIC5.7□□□□□ -1.5
LIG1P18858 RN7SKP256-201ENST00000517201 314 ntBASIC5.7□□□□□ -1.5
LIG1P18858 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.7□□□□□ -1.5
LIG1P18858 AC092490.3-201ENST00000545370 572 ntBASIC5.7□□□□□ -1.5
LIG1P18858 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.7□□□□□ -1.5
LIG1P18858 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.7□□□□□ -1.5
LIG1P18858 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
LIG1P18858 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.7□□□□□ -1.5
LIG1P18858 AC087763.1-201ENST00000603391 286 ntBASIC5.7□□□□□ -1.5
LIG1P18858 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.7□□□□□ -1.5
LIG1P18858 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.7□□□□□ -1.5
LIG1P18858 AC009318.4-201ENST00000620496 486 ntBASIC5.7□□□□□ -1.5
LIG1P18858 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.7□□□□□ -1.5
LIG1P18858 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.7□□□□□ -1.5
LIG1P18858 AL596275.2-204ENST00000641628 552 ntBASIC5.7□□□□□ -1.5
LIG1P18858 AL596275.2-206ENST00000641957 626 ntBASIC5.7□□□□□ -1.5
LIG1P18858 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.7□□□□□ -1.5
LIG1P18858 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.7□□□□□ -1.5
LIG1P18858 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LIG1P18858 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LIG1P18858 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LIG1P18858 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.7□□□□□ -1.5
LIG1P18858 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.7□□□□□ -1.5
LIG1P18858 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LIG1P18858 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LIG1P18858 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LIG1P18858 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
LIG1P18858 MAPK10-286ENST00000641208 8747 ntBASIC5.69□□□□□ -1.5
LIG1P18858 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LIG1P18858 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.69□□□□□ -1.5
LIG1P18858 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LIG1P18858 AC107081.3-201ENST00000612715 2034 ntBASIC5.69□□□□□ -1.5
LIG1P18858 AL031119.1-201ENST00000404707 1879 ntBASIC5.69□□□□□ -1.5
LIG1P18858 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.69□□□□□ -1.5
LIG1P18858 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LIG1P18858 AC009643.2-201ENST00000603543 1448 ntBASIC5.69□□□□□ -1.5
LIG1P18858 AL592182.3-201ENST00000642132 3304 ntBASIC5.69□□□□□ -1.5
LIG1P18858 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
LIG1P18858 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
LIG1P18858 RNU6-254P-201ENST00000363377 107 ntBASIC5.69□□□□□ -1.5
LIG1P18858 Y_RNA.202-201ENST00000364083 110 ntBASIC5.69□□□□□ -1.5
LIG1P18858 Y_RNA.259-201ENST00000364619 101 ntBASIC5.69□□□□□ -1.5
LIG1P18858 Y_RNA.579-201ENST00000390939 94 ntBASIC5.69□□□□□ -1.5
LIG1P18858 AC016769.3-201ENST00000396562 315 ntBASIC5.69□□□□□ -1.5
LIG1P18858 RPL7P60-201ENST00000397636 735 ntBASIC5.69□□□□□ -1.5
LIG1P18858 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.69□□□□□ -1.5
LIG1P18858 CKS1BP6-201ENST00000424932 240 ntBASIC5.69□□□□□ -1.5
LIG1P18858 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.69□□□□□ -1.5
LIG1P18858 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.69□□□□□ -1.5
LIG1P18858 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.69□□□□□ -1.5
LIG1P18858 EEF1A1P1-201ENST00000447052 739 ntBASIC5.69□□□□□ -1.5
LIG1P18858 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.69□□□□□ -1.5
LIG1P18858 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LIG1P18858 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.69□□□□□ -1.5
LIG1P18858 RPL23AP41-201ENST00000484754 458 ntBASIC5.69□□□□□ -1.5
LIG1P18858 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.69□□□□□ -1.5
LIG1P18858 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.69□□□□□ -1.5
LIG1P18858 TXNP6-201ENST00000510190 310 ntBASIC5.69□□□□□ -1.5
LIG1P18858 AC004980.4-201ENST00000513375 203 ntBASIC5.69□□□□□ -1.5
LIG1P18858 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.69□□□□□ -1.5
LIG1P18858 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.69□□□□□ -1.5
LIG1P18858 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.69□□□□□ -1.5
LIG1P18858 OR5BN1P-201ENST00000532955 829 ntBASIC5.69□□□□□ -1.5
LIG1P18858 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.69□□□□□ -1.5
LIG1P18858 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.69□□□□□ -1.5
LIG1P18858 MIR8069-1-201ENST00000616627 86 ntBASIC5.69□□□□□ -1.5
LIG1P18858 MIR8069-2-201ENST00000621412 86 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms