Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
ATF4P18848 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATF4P18848 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.81□□□□□ -1.64
ATF4P18848 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATF4P18848 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATF4P18848 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
ATF4P18848 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATF4P18848 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATF4P18848 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ATF4P18848 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC4.8□□□□□ -1.64
ATF4P18848 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ATF4P18848 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.8□□□□□ -1.64
ATF4P18848 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.8□□□□□ -1.64
ATF4P18848 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.8□□□□□ -1.64
ATF4P18848 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
ATF4P18848 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
ATF4P18848 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.8□□□□□ -1.64
ATF4P18848 RNU4-79P-201ENST00000362764 141 ntBASIC4.8□□□□□ -1.64
ATF4P18848 SNORD35A-201ENST00000363389 86 ntBASIC4.8□□□□□ -1.64
ATF4P18848 RNA5SP198-201ENST00000410376 127 ntBASIC4.8□□□□□ -1.64
ATF4P18848 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC4.8□□□□□ -1.64
ATF4P18848 BX682237.1-201ENST00000415016 335 ntBASIC4.8□□□□□ -1.64
ATF4P18848 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.8□□□□□ -1.64
ATF4P18848 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.8□□□□□ -1.64
ATF4P18848 AL389925.1-201ENST00000432257 728 ntBASIC4.8□□□□□ -1.64
ATF4P18848 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.8□□□□□ -1.64
ATF4P18848 LINC00328-2P-201ENST00000436585 219 ntBASIC4.8□□□□□ -1.64
ATF4P18848 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.8□□□□□ -1.64
ATF4P18848 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC4.8□□□□□ -1.64
ATF4P18848 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.8□□□□□ -1.64
ATF4P18848 RNU7-167P-201ENST00000459160 62 ntBASIC4.8□□□□□ -1.64
ATF4P18848 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.8□□□□□ -1.64
ATF4P18848 RN7SL362P-201ENST00000494228 267 ntBASIC4.8□□□□□ -1.64
ATF4P18848 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.8□□□□□ -1.64
ATF4P18848 AC079140.5-201ENST00000507882 310 ntBASIC4.8□□□□□ -1.64
ATF4P18848 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.8□□□□□ -1.64
ATF4P18848 RNA5SP473-201ENST00000516402 125 ntBASIC4.8□□□□□ -1.64
ATF4P18848 Y_RNA.691-201ENST00000516611 103 ntBASIC4.8□□□□□ -1.64
ATF4P18848 RNU6-914P-201ENST00000516749 109 ntBASIC4.8□□□□□ -1.64
ATF4P18848 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.8□□□□□ -1.64
ATF4P18848 AC090136.1-201ENST00000520009 240 ntBASIC4.8□□□□□ -1.64
ATF4P18848 AC116917.1-201ENST00000520558 305 ntBASIC4.8□□□□□ -1.64
ATF4P18848 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.8□□□□□ -1.64
ATF4P18848 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.8□□□□□ -1.64
ATF4P18848 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.8□□□□□ -1.64
ATF4P18848 AC022882.1-201ENST00000532142 501 ntBASIC4.8□□□□□ -1.64
ATF4P18848 CBX3P7-201ENST00000532876 502 ntBASIC4.8□□□□□ -1.64
ATF4P18848 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.8□□□□□ -1.64
ATF4P18848 AC024940.3-201ENST00000538551 316 ntBASIC4.8□□□□□ -1.64
ATF4P18848 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
ATF4P18848 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.8□□□□□ -1.64
ATF4P18848 TPRX1P1-201ENST00000557620 319 ntBASIC4.8□□□□□ -1.64
ATF4P18848 RPL23AP87-202ENST00000573039 466 ntBASIC4.8□□□□□ -1.64
ATF4P18848 AL355375.2-201ENST00000574825 175 ntBASIC4.8□□□□□ -1.64
ATF4P18848 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.8□□□□□ -1.64
ATF4P18848 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.8□□□□□ -1.64
ATF4P18848 SNORA74.4-201ENST00000607595 199 ntBASIC4.8□□□□□ -1.64
ATF4P18848 uc_338.15-201ENST00000615470 191 ntBASIC4.8□□□□□ -1.64
ATF4P18848 AC073593.1-201ENST00000624500 411 ntBASIC4.8□□□□□ -1.64
ATF4P18848 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
ATF4P18848 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.8□□□□□ -1.64
ATF4P18848 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ATF4P18848 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ATF4P18848 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
ATF4P18848 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
ATF4P18848 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ATF4P18848 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATF4P18848 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
ATF4P18848 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.79□□□□□ -1.64
ATF4P18848 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATF4P18848 AC116096.1-201ENST00000566804 2314 ntBASIC4.79□□□□□ -1.64
ATF4P18848 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.79□□□□□ -1.64
ATF4P18848 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
ATF4P18848 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATF4P18848 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.79□□□□□ -1.64
ATF4P18848 Y_RNA.184-201ENST00000363884 108 ntBASIC4.79□□□□□ -1.64
ATF4P18848 RNU1-84P-201ENST00000365447 164 ntBASIC4.79□□□□□ -1.64
ATF4P18848 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
ATF4P18848 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
ATF4P18848 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.79□□□□□ -1.64
ATF4P18848 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC4.79□□□□□ -1.64
ATF4P18848 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.79□□□□□ -1.64
ATF4P18848 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.79□□□□□ -1.64
ATF4P18848 RPL21P93-201ENST00000480465 489 ntBASIC4.79□□□□□ -1.64
ATF4P18848 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
ATF4P18848 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.79□□□□□ -1.64
ATF4P18848 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATF4P18848 APOOP4-201ENST00000513530 597 ntBASIC4.79□□□□□ -1.64
ATF4P18848 AP006245.2-201ENST00000522004 300 ntBASIC4.79□□□□□ -1.64
ATF4P18848 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.79□□□□□ -1.64
ATF4P18848 AP004242.1-201ENST00000533701 349 ntBASIC4.79□□□□□ -1.64
ATF4P18848 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.79□□□□□ -1.64
ATF4P18848 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
ATF4P18848 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.79□□□□□ -1.64
ATF4P18848 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.79□□□□□ -1.64
ATF4P18848 AC026956.1-201ENST00000558741 396 ntBASIC4.79□□□□□ -1.64
ATF4P18848 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.79□□□□□ -1.64
ATF4P18848 MIR3154-201ENST00000577829 84 ntBASIC4.79□□□□□ -1.64
ATF4P18848 AC026898.1-201ENST00000586404 571 ntBASIC4.79□□□□□ -1.64
ATF4P18848 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms