Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.2□□□□□ -2.06
VCANP13611 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VCANP13611 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
VCANP13611 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VCANP13611 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.2□□□□□ -2.06
VCANP13611 RNU2-32P-201ENST00000411193 191 ntBASIC2.19□□□□□ -2.06
VCANP13611 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.19□□□□□ -2.06
VCANP13611 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.19□□□□□ -2.06
VCANP13611 AC022634.1-201ENST00000520765 532 ntBASIC2.19□□□□□ -2.06
VCANP13611 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.19□□□□□ -2.06
VCANP13611 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC2.19□□□□□ -2.06
VCANP13611 Z99129.2-201ENST00000619967 314 ntBASIC2.19□□□□□ -2.06
VCANP13611 AL445437.1-201ENST00000623157 3087 ntBASIC2.19□□□□□ -2.06
VCANP13611 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
VCANP13611 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
VCANP13611 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
VCANP13611 EI24P1-201ENST00000416584 867 ntBASIC2.19□□□□□ -2.06
VCANP13611 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.19□□□□□ -2.06
VCANP13611 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC2.19□□□□□ -2.06
VCANP13611 AC034244.1-201ENST00000507687 207 ntBASIC2.19□□□□□ -2.06
VCANP13611 AC008526.1-201ENST00000509149 338 ntBASIC2.19□□□□□ -2.06
VCANP13611 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC2.19□□□□□ -2.06
VCANP13611 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
VCANP13611 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
VCANP13611 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.19□□□□□ -2.06
VCANP13611 HSPE1P28-201ENST00000443139 211 ntBASIC2.19□□□□□ -2.06
VCANP13611 RN7SKP49-201ENST00000516675 260 ntBASIC2.19□□□□□ -2.06
VCANP13611 RPL21P5-201ENST00000554662 472 ntBASIC2.19□□□□□ -2.06
VCANP13611 AC234782.4-201ENST00000417646 1048 ntBASIC2.18□□□□□ -2.06
VCANP13611 AL358453.1-201ENST00000422522 250 ntBASIC2.18□□□□□ -2.06
VCANP13611 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
VCANP13611 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.18□□□□□ -2.06
VCANP13611 AC021146.5-201ENST00000503544 545 ntBASIC2.18□□□□□ -2.06
VCANP13611 TXNP6-201ENST00000510190 310 ntBASIC2.18□□□□□ -2.06
VCANP13611 OR4P1P-201ENST00000530808 1136 ntBASIC2.18□□□□□ -2.06
VCANP13611 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.18□□□□□ -2.06
VCANP13611 AC011492.1-201ENST00000600023 315 ntBASIC2.18□□□□□ -2.06
VCANP13611 AC091834.1-201ENST00000614543 472 ntBASIC2.18□□□□□ -2.06
VCANP13611 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
VCANP13611 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.18□□□□□ -2.06
VCANP13611 KPNA2P1-201ENST00000458289 1591 ntBASIC2.18□□□□□ -2.06
VCANP13611 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
VCANP13611 AC009487.2-201ENST00000420969 6821 ntBASIC2.18□□□□□ -2.06
VCANP13611 SNORA25.6-201ENST00000364121 118 ntBASIC2.18□□□□□ -2.06
VCANP13611 MIR9-3-201ENST00000385084 90 ntBASIC2.18□□□□□ -2.06
VCANP13611 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC2.18□□□□□ -2.06
VCANP13611 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.18□□□□□ -2.06
VCANP13611 AL118520.1-201ENST00000450770 291 ntBASIC2.18□□□□□ -2.06
VCANP13611 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC2.18□□□□□ -2.06
VCANP13611 ALDH7A1P3-201ENST00000492517 345 ntBASIC2.18□□□□□ -2.06
VCANP13611 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.18□□□□□ -2.06
VCANP13611 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.18□□□□□ -2.06
VCANP13611 OR4H12P-201ENST00000556269 907 ntBASIC2.18□□□□□ -2.06
VCANP13611 MIR7973-1-201ENST00000614683 76 ntBASIC2.18□□□□□ -2.06
VCANP13611 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.18□□□□□ -2.06
VCANP13611 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.18□□□□□ -2.06
VCANP13611 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
VCANP13611 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
VCANP13611 AC007182.2-201ENST00000489251 402 ntBASIC2.18□□□□□ -2.06
VCANP13611 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC2.18□□□□□ -2.06
VCANP13611 AP001207.1-201ENST00000524051 481 ntBASIC2.18□□□□□ -2.06
VCANP13611 AC105137.2-201ENST00000569073 466 ntBASIC2.18□□□□□ -2.06
VCANP13611 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.18□□□□□ -2.06
VCANP13611 MTND5P12-201ENST00000502851 1449 ntBASIC2.17□□□□□ -2.06
VCANP13611 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
VCANP13611 RN7SKP226-201ENST00000364912 300 ntBASIC2.17□□□□□ -2.06
VCANP13611 AL353597.2-202ENST00000434901 373 ntBASIC2.17□□□□□ -2.06
VCANP13611 HMGB1P31-201ENST00000437242 427 ntBASIC2.17□□□□□ -2.06
VCANP13611 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.17□□□□□ -2.06
VCANP13611 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.17□□□□□ -2.06
VCANP13611 AC083843.2-201ENST00000568248 6253 ntBASIC2.17□□□□□ -2.06
VCANP13611 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
VCANP13611 AC093151.1-201ENST00000427711 313 ntBASIC2.17□□□□□ -2.06
VCANP13611 MTND3P6-201ENST00000485242 339 ntBASIC2.17□□□□□ -2.06
VCANP13611 AC068305.1-201ENST00000497406 726 ntBASIC2.17□□□□□ -2.06
VCANP13611 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.17□□□□□ -2.06
VCANP13611 OR7K1P-201ENST00000546439 926 ntBASIC2.17□□□□□ -2.06
VCANP13611 MIR4255-201ENST00000579351 72 ntBASIC2.17□□□□□ -2.06
VCANP13611 MIR5092-201ENST00000583139 88 ntBASIC2.17□□□□□ -2.06
VCANP13611 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
VCANP13611 AC009487.4-201ENST00000624969 3585 ntBASIC2.17□□□□□ -2.06
VCANP13611 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC2.17□□□□□ -2.06
VCANP13611 AC008432.1-201ENST00000615912 1320 ntBASIC2.17□□□□□ -2.06
VCANP13611 MAPK10-266ENST00000641066 6555 ntBASIC2.17□□□□□ -2.06
VCANP13611 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC2.17□□□□□ -2.06
VCANP13611 AL355379.1-201ENST00000405542 640 ntBASIC2.16□□□□□ -2.06
VCANP13611 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC2.16□□□□□ -2.06
VCANP13611 OR4A45P-201ENST00000529954 901 ntBASIC2.16□□□□□ -2.06
VCANP13611 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.16□□□□□ -2.06
VCANP13611 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.16□□□□□ -2.06
VCANP13611 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
VCANP13611 MTND5P3-201ENST00000438536 1800 ntBASIC2.16□□□□□ -2.06
VCANP13611 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.16□□□□□ -2.06
VCANP13611 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.16□□□□□ -2.06
VCANP13611 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.16□□□□□ -2.06
VCANP13611 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.16□□□□□ -2.06
VCANP13611 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.16□□□□□ -2.06
VCANP13611 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
VCANP13611 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
VCANP13611 HMGB1P27-201ENST00000431429 603 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms