Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 MIR4498-201ENST00000577599 66 ntBASIC3.57□□□□□ -1.84
TOP2AP11388 AC093673.2-201ENST00000609674 331 ntBASIC3.57□□□□□ -1.84
TOP2AP11388 AL359198.2-201ENST00000611836 194 ntBASIC3.57□□□□□ -1.84
TOP2AP11388 AC244517.12-201ENST00000623581 663 ntBASIC3.57□□□□□ -1.84
TOP2AP11388 ADAM3A-203ENST00000461344 2157 ntBASIC3.57□□□□□ -1.84
TOP2AP11388 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
TOP2AP11388 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.56□□□□□ -1.84
TOP2AP11388 MIR583-201ENST00000384846 75 ntBASIC3.56□□□□□ -1.84
TOP2AP11388 MIR9-3-201ENST00000385084 90 ntBASIC3.56□□□□□ -1.84
TOP2AP11388 DHFRP5-201ENST00000406944 564 ntBASIC3.56□□□□□ -1.84
TOP2AP11388 SNORA79B-201ENST00000410557 148 ntBASIC3.56□□□□□ -1.84
TOP2AP11388 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.56□□□□□ -1.84
TOP2AP11388 RPL7P54-201ENST00000438336 674 ntBASIC3.56□□□□□ -1.84
TOP2AP11388 AL445669.2-201ENST00000454425 421 ntBASIC3.56□□□□□ -1.84
TOP2AP11388 AC090819.1-201ENST00000523800 1111 ntBASIC3.56□□□□□ -1.84
TOP2AP11388 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.56□□□□□ -1.84
TOP2AP11388 AC010198.2-201ENST00000550612 259 ntBASIC3.56□□□□□ -1.84
TOP2AP11388 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.56□□□□□ -1.84
TOP2AP11388 AC016542.2-201ENST00000624201 619 ntBASIC3.56□□□□□ -1.84
TOP2AP11388 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.56□□□□□ -1.84
TOP2AP11388 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TOP2AP11388 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
TOP2AP11388 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.55□□□□□ -1.84
TOP2AP11388 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.55□□□□□ -1.84
TOP2AP11388 RNA5SP239-201ENST00000410218 129 ntBASIC3.55□□□□□ -1.84
TOP2AP11388 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.55□□□□□ -1.84
TOP2AP11388 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.55□□□□□ -1.84
TOP2AP11388 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.55□□□□□ -1.84
TOP2AP11388 AP000705.1-201ENST00000454567 350 ntBASIC3.55□□□□□ -1.84
TOP2AP11388 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.55□□□□□ -1.84
TOP2AP11388 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
TOP2AP11388 MIR4506-201ENST00000584693 77 ntBASIC3.55□□□□□ -1.84
TOP2AP11388 AL137847.3-201ENST00000611521 109 ntBASIC3.55□□□□□ -1.84
TOP2AP11388 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
TOP2AP11388 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TOP2AP11388 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.55□□□□□ -1.84
TOP2AP11388 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.55□□□□□ -1.84
TOP2AP11388 XIAPP3-201ENST00000312918 795 ntBASIC3.54□□□□□ -1.84
TOP2AP11388 SPA17P1-201ENST00000416656 452 ntBASIC3.54□□□□□ -1.84
TOP2AP11388 AL358453.1-201ENST00000422522 250 ntBASIC3.54□□□□□ -1.84
TOP2AP11388 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.54□□□□□ -1.84
TOP2AP11388 USP9YP8-201ENST00000441913 500 ntBASIC3.54□□□□□ -1.84
TOP2AP11388 MIR4255-201ENST00000579351 72 ntBASIC3.54□□□□□ -1.84
TOP2AP11388 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TOP2AP11388 AC093909.5-201ENST00000621839 1799 ntBASIC3.54□□□□□ -1.84
TOP2AP11388 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.54□□□□□ -1.84
TOP2AP11388 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TOP2AP11388 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TOP2AP11388 AC008173.1-201ENST00000418901 264 ntBASIC3.54□□□□□ -1.84
TOP2AP11388 SAR1AP4-201ENST00000429225 591 ntBASIC3.54□□□□□ -1.84
TOP2AP11388 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.54□□□□□ -1.84
TOP2AP11388 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.54□□□□□ -1.84
TOP2AP11388 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.54□□□□□ -1.84
TOP2AP11388 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.54□□□□□ -1.84
TOP2AP11388 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.54□□□□□ -1.84
TOP2AP11388 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.54□□□□□ -1.84
TOP2AP11388 Y_RNA.783-201ENST00000613546 102 ntBASIC3.54□□□□□ -1.84
TOP2AP11388 AP003499.2-201ENST00000624100 483 ntBASIC3.54□□□□□ -1.84
TOP2AP11388 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.54□□□□□ -1.84
TOP2AP11388 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TOP2AP11388 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
TOP2AP11388 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.53□□□□□ -1.84
TOP2AP11388 Y_RNA.140-201ENST00000363474 103 ntBASIC3.53□□□□□ -1.84
TOP2AP11388 Y_RNA.238-201ENST00000364441 102 ntBASIC3.53□□□□□ -1.84
TOP2AP11388 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.53□□□□□ -1.84
TOP2AP11388 OR52A4P-203ENST00000498233 1014 ntBASIC3.53□□□□□ -1.84
TOP2AP11388 AC091917.2-201ENST00000505002 744 ntBASIC3.53□□□□□ -1.84
TOP2AP11388 RPS27AP18-201ENST00000515536 459 ntBASIC3.53□□□□□ -1.84
TOP2AP11388 AP000889.2-201ENST00000532684 490 ntBASIC3.53□□□□□ -1.84
TOP2AP11388 AC091834.1-201ENST00000614543 472 ntBASIC3.53□□□□□ -1.84
TOP2AP11388 Y_RNA.595-201ENST00000410403 105 ntBASIC3.52□□□□□ -1.85
TOP2AP11388 AC108667.1-201ENST00000428618 249 ntBASIC3.52□□□□□ -1.85
TOP2AP11388 SNORD13-201ENST00000459299 104 ntBASIC3.52□□□□□ -1.85
TOP2AP11388 FAM92A1P1-201ENST00000528023 890 ntBASIC3.52□□□□□ -1.85
TOP2AP11388 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TOP2AP11388 GNAI2P1-201ENST00000541815 315 ntBASIC3.52□□□□□ -1.85
TOP2AP11388 AC017076.1-201ENST00000607613 578 ntBASIC3.52□□□□□ -1.85
TOP2AP11388 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TOP2AP11388 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TOP2AP11388 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TOP2AP11388 RPL7P53-201ENST00000421245 739 ntBASIC3.51□□□□□ -1.85
TOP2AP11388 ISCA1P6-201ENST00000427740 390 ntBASIC3.51□□□□□ -1.85
TOP2AP11388 Z82205.1-201ENST00000428456 297 ntBASIC3.51□□□□□ -1.85
TOP2AP11388 CBWD4P-201ENST00000445695 655 ntBASIC3.51□□□□□ -1.85
TOP2AP11388 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.51□□□□□ -1.85
TOP2AP11388 RPS29P11-201ENST00000496507 171 ntBASIC3.51□□□□□ -1.85
TOP2AP11388 MIR3670-2-201ENST00000582974 65 ntBASIC3.51□□□□□ -1.85
TOP2AP11388 MIR3670-1-201ENST00000584160 65 ntBASIC3.51□□□□□ -1.85
TOP2AP11388 MIR3670-3-201ENST00000584855 65 ntBASIC3.51□□□□□ -1.85
TOP2AP11388 AC073387.2-201ENST00000604797 784 ntBASIC3.51□□□□□ -1.85
TOP2AP11388 MIR3670-4-201ENST00000612260 65 ntBASIC3.51□□□□□ -1.85
TOP2AP11388 AC010297.1-201ENST00000623948 149 ntBASIC3.51□□□□□ -1.85
TOP2AP11388 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.51□□□□□ -1.85
TOP2AP11388 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.5□□□□□ -1.85
TOP2AP11388 RPL23AP70-201ENST00000483361 460 ntBASIC3.5□□□□□ -1.85
TOP2AP11388 TBCAP3-201ENST00000512475 312 ntBASIC3.5□□□□□ -1.85
TOP2AP11388 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.5□□□□□ -1.85
TOP2AP11388 OR11H5P-201ENST00000554039 926 ntBASIC3.5□□□□□ -1.85
TOP2AP11388 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.5□□□□□ -1.85
TOP2AP11388 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms