Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC172P0C7W6 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CCDC172P0C7W6 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC172P0C7W6 RNU1-85P-201ENST00000364127 164 ntBASIC3.14□□□□□ -1.91
CCDC172P0C7W6 RNU1-138P-201ENST00000384093 164 ntBASIC3.14□□□□□ -1.91
CCDC172P0C7W6 RNU6-441P-201ENST00000384545 106 ntBASIC3.14□□□□□ -1.91
CCDC172P0C7W6 UBE2V1P9-201ENST00000414760 368 ntBASIC3.14□□□□□ -1.91
CCDC172P0C7W6 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC172P0C7W6 SUMO1P4-201ENST00000429430 302 ntBASIC3.14□□□□□ -1.91
CCDC172P0C7W6 AC129850.1-201ENST00000436203 508 ntBASIC3.14□□□□□ -1.91
CCDC172P0C7W6 LSM1P1-201ENST00000438629 273 ntBASIC3.14□□□□□ -1.91
CCDC172P0C7W6 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC172P0C7W6 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC172P0C7W6 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC172P0C7W6 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.14□□□□□ -1.91
CCDC172P0C7W6 DNAJC19P8-201ENST00000452887 259 ntBASIC3.14□□□□□ -1.91
CCDC172P0C7W6 AL672167.3-201ENST00000465951 960 ntBASIC3.14□□□□□ -1.91
CCDC172P0C7W6 AP000852.1-201ENST00000472460 573 ntBASIC3.14□□□□□ -1.91
CCDC172P0C7W6 RPS27P23-201ENST00000487608 251 ntBASIC3.14□□□□□ -1.91
CCDC172P0C7W6 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.14□□□□□ -1.91
CCDC172P0C7W6 AC074250.1-201ENST00000511117 192 ntBASIC3.14□□□□□ -1.91
CCDC172P0C7W6 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC172P0C7W6 AC026412.2-201ENST00000512270 1075 ntBASIC3.14□□□□□ -1.91
CCDC172P0C7W6 HMGB1P41-201ENST00000520234 440 ntBASIC3.14□□□□□ -1.91
CCDC172P0C7W6 ELOCP31-201ENST00000540463 467 ntBASIC3.14□□□□□ -1.91
CCDC172P0C7W6 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC172P0C7W6 H3F3AP1-201ENST00000559984 334 ntBASIC3.14□□□□□ -1.91
CCDC172P0C7W6 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC172P0C7W6 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC172P0C7W6 AC012254.4-201ENST00000588843 273 ntBASIC3.14□□□□□ -1.91
CCDC172P0C7W6 AC025588.3-201ENST00000604182 274 ntBASIC3.14□□□□□ -1.91
CCDC172P0C7W6 AL513477.2-201ENST00000607858 568 ntBASIC3.14□□□□□ -1.91
CCDC172P0C7W6 AC008083.4-201ENST00000615076 444 ntBASIC3.14□□□□□ -1.91
CCDC172P0C7W6 AC244100.1-202ENST00000621554 382 ntBASIC3.14□□□□□ -1.91
CCDC172P0C7W6 AC009039.2-201ENST00000624524 529 ntBASIC3.14□□□□□ -1.91
CCDC172P0C7W6 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC172P0C7W6 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CCDC172P0C7W6 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC172P0C7W6 RPL9P7-201ENST00000330965 580 ntBASIC3.13□□□□□ -1.91
CCDC172P0C7W6 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC172P0C7W6 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC172P0C7W6 RNVU1-14-201ENST00000384770 164 ntBASIC3.13□□□□□ -1.91
CCDC172P0C7W6 MIR512-1-201ENST00000384913 84 ntBASIC3.13□□□□□ -1.91
CCDC172P0C7W6 MIR34B-201ENST00000385076 84 ntBASIC3.13□□□□□ -1.91
CCDC172P0C7W6 SNORA11C-201ENST00000408532 129 ntBASIC3.13□□□□□ -1.91
CCDC172P0C7W6 DUTP6-201ENST00000425573 462 ntBASIC3.13□□□□□ -1.91
CCDC172P0C7W6 YME1L1P1-201ENST00000429435 297 ntBASIC3.13□□□□□ -1.91
CCDC172P0C7W6 ZNF965P-201ENST00000432501 817 ntBASIC3.13□□□□□ -1.91
CCDC172P0C7W6 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC172P0C7W6 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.13□□□□□ -1.91
CCDC172P0C7W6 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC172P0C7W6 DSTNP2-201ENST00000504533 515 ntBASIC3.13□□□□□ -1.91
CCDC172P0C7W6 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC172P0C7W6 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC172P0C7W6 AP002404.1-201ENST00000532005 451 ntBASIC3.13□□□□□ -1.91
CCDC172P0C7W6 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC172P0C7W6 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC172P0C7W6 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC172P0C7W6 BNIP3P11-201ENST00000603878 563 ntBASIC3.13□□□□□ -1.91
CCDC172P0C7W6 AC106791.2-201ENST00000604680 391 ntBASIC3.13□□□□□ -1.91
CCDC172P0C7W6 AL133507.1-201ENST00000605269 557 ntBASIC3.13□□□□□ -1.91
CCDC172P0C7W6 AC021851.1-201ENST00000608537 1082 ntBASIC3.13□□□□□ -1.91
CCDC172P0C7W6 AC090116.1-201ENST00000615679 446 ntBASIC3.13□□□□□ -1.91
CCDC172P0C7W6 CYCSP41-201ENST00000616920 296 ntBASIC3.13□□□□□ -1.91
CCDC172P0C7W6 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC172P0C7W6 AC026422.1-201ENST00000623961 452 ntBASIC3.13□□□□□ -1.91
CCDC172P0C7W6 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC172P0C7W6 AL590396.2-201ENST00000636511 1041 ntBASIC3.13□□□□□ -1.91
CCDC172P0C7W6 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC172P0C7W6 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC172P0C7W6 SEC63P2-201ENST00000503863 1939 ntBASIC3.13□□□□□ -1.91
CCDC172P0C7W6 AC000403.1-201ENST00000613696 3585 ntBASIC3.12□□□□□ -1.91
CCDC172P0C7W6 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC172P0C7W6 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC172P0C7W6 RNVU1-3-201ENST00000364313 161 ntBASIC3.12□□□□□ -1.91
CCDC172P0C7W6 SNORA54-201ENST00000384281 123 ntBASIC3.12□□□□□ -1.91
CCDC172P0C7W6 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC172P0C7W6 PTP4A1P3-201ENST00000433661 420 ntBASIC3.12□□□□□ -1.91
CCDC172P0C7W6 AL513321.1-201ENST00000441175 761 ntBASIC3.12□□□□□ -1.91
CCDC172P0C7W6 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.12□□□□□ -1.91
CCDC172P0C7W6 AC015908.1-201ENST00000478739 476 ntBASIC3.12□□□□□ -1.91
CCDC172P0C7W6 RN7SL504P-201ENST00000494496 287 ntBASIC3.12□□□□□ -1.91
CCDC172P0C7W6 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC172P0C7W6 AC008885.1-201ENST00000514930 301 ntBASIC3.12□□□□□ -1.91
CCDC172P0C7W6 SNORA31.8-201ENST00000516327 108 ntBASIC3.12□□□□□ -1.91
CCDC172P0C7W6 RNU6-551P-201ENST00000516661 103 ntBASIC3.12□□□□□ -1.91
CCDC172P0C7W6 AC087373.1-201ENST00000524920 491 ntBASIC3.12□□□□□ -1.91
CCDC172P0C7W6 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC172P0C7W6 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC172P0C7W6 NBEAP1-201ENST00000554452 979 ntBASIC3.12□□□□□ -1.91
CCDC172P0C7W6 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC172P0C7W6 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC172P0C7W6 AC245036.5-201ENST00000596330 847 ntBASIC3.12□□□□□ -1.91
CCDC172P0C7W6 AC124312.4-201ENST00000605533 310 ntBASIC3.12□□□□□ -1.91
CCDC172P0C7W6 AL360181.4-201ENST00000621752 134 ntBASIC3.12□□□□□ -1.91
CCDC172P0C7W6 AC091953.5-201ENST00000622919 233 ntBASIC3.12□□□□□ -1.91
CCDC172P0C7W6 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC172P0C7W6 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC172P0C7W6 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC172P0C7W6 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms