Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PWAR6-201ENST00000552334 4618 ntBASIC1.33□□□□□ -2.2
APOBP04114 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
APOBP04114 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
APOBP04114 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
APOBP04114 MIR378A-201ENST00000362177 66 ntBASIC1.33□□□□□ -2.2
APOBP04114 AL590084.1-201ENST00000407885 387 ntBASIC1.33□□□□□ -2.2
APOBP04114 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC1.33□□□□□ -2.2
APOBP04114 AC245517.2-201ENST00000442890 346 ntBASIC1.33□□□□□ -2.2
APOBP04114 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.33□□□□□ -2.2
APOBP04114 MIR4255-201ENST00000579351 72 ntBASIC1.33□□□□□ -2.2
APOBP04114 OOSP1P2-201ENST00000579644 351 ntBASIC1.33□□□□□ -2.2
APOBP04114 FRG1DP-201ENST00000635586 771 ntBASIC1.33□□□□□ -2.2
APOBP04114 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.33□□□□□ -2.2
APOBP04114 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
APOBP04114 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
APOBP04114 RNA5SP210-201ENST00000391034 120 ntBASIC1.33□□□□□ -2.2
APOBP04114 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC1.33□□□□□ -2.2
APOBP04114 NDUFA5P4-201ENST00000436704 385 ntBASIC1.33□□□□□ -2.2
APOBP04114 AC104090.1-201ENST00000506341 1171 ntBASIC1.33□□□□□ -2.2
APOBP04114 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC1.33□□□□□ -2.2
APOBP04114 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.33□□□□□ -2.2
APOBP04114 HSP90AA5P-201ENST00000438353 2192 ntBASIC1.33□□□□□ -2.2
APOBP04114 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.33□□□□□ -2.2
APOBP04114 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
APOBP04114 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
APOBP04114 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.33□□□□□ -2.2
APOBP04114 AL133412.1-201ENST00000380194 2992 ntBASIC1.33□□□□□ -2.2
APOBP04114 RNA5SP190-201ENST00000365222 118 ntBASIC1.33□□□□□ -2.2
APOBP04114 AL356806.1-201ENST00000422524 916 ntBASIC1.33□□□□□ -2.2
APOBP04114 RPS24P8-201ENST00000431490 402 ntBASIC1.33□□□□□ -2.2
APOBP04114 RPL36AP6-201ENST00000435770 321 ntBASIC1.33□□□□□ -2.2
APOBP04114 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.33□□□□□ -2.2
APOBP04114 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.33□□□□□ -2.2
APOBP04114 VN1R80P-201ENST00000597126 338 ntBASIC1.33□□□□□ -2.2
APOBP04114 AP000787.2-201ENST00000604432 568 ntBASIC1.33□□□□□ -2.2
APOBP04114 AC093591.3-201ENST00000634516 308 ntBASIC1.33□□□□□ -2.2
APOBP04114 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
APOBP04114 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
APOBP04114 AC026241.1-201ENST00000517873 2142 ntBASIC1.32□□□□□ -2.2
APOBP04114 KPNA2P1-201ENST00000458289 1591 ntBASIC1.32□□□□□ -2.2
APOBP04114 MIR96-201ENST00000362288 78 ntBASIC1.32□□□□□ -2.2
APOBP04114 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.32□□□□□ -2.2
APOBP04114 RNU6-328P-201ENST00000390887 106 ntBASIC1.32□□□□□ -2.2
APOBP04114 RPS7P2-201ENST00000435134 607 ntBASIC1.32□□□□□ -2.2
APOBP04114 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.32□□□□□ -2.2
APOBP04114 AP003467.2-201ENST00000520175 319 ntBASIC1.32□□□□□ -2.2
APOBP04114 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC1.32□□□□□ -2.2
APOBP04114 AC093909.5-201ENST00000621839 1799 ntBASIC1.32□□□□□ -2.2
APOBP04114 AL451074.3-201ENST00000437709 472 ntBASIC1.32□□□□□ -2.2
APOBP04114 TVP23BP2-201ENST00000455082 615 ntBASIC1.32□□□□□ -2.2
APOBP04114 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.32□□□□□ -2.2
APOBP04114 PVT1_3.1-201ENST00000620853 95 ntBASIC1.32□□□□□ -2.2
APOBP04114 AL160394.1-201ENST00000624765 724 ntBASIC1.32□□□□□ -2.2
APOBP04114 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.32□□□□□ -2.2
APOBP04114 AL445437.1-201ENST00000623157 3087 ntBASIC1.32□□□□□ -2.2
APOBP04114 AC012078.1-201ENST00000405035 1646 ntBASIC1.32□□□□□ -2.2
APOBP04114 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
APOBP04114 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
APOBP04114 ANKRD62P1-201ENST00000434304 1623 ntBASIC1.32□□□□□ -2.2
APOBP04114 USP9YP6-201ENST00000413550 854 ntBASIC1.32□□□□□ -2.2
APOBP04114 LAMTOR5P1-201ENST00000444290 270 ntBASIC1.32□□□□□ -2.2
APOBP04114 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC1.32□□□□□ -2.2
APOBP04114 USP9YP34-201ENST00000453983 808 ntBASIC1.32□□□□□ -2.2
APOBP04114 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC1.32□□□□□ -2.2
APOBP04114 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC1.32□□□□□ -2.2
APOBP04114 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.32□□□□□ -2.2
APOBP04114 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.32□□□□□ -2.2
APOBP04114 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.32□□□□□ -2.2
APOBP04114 AC002076.2-201ENST00000617362 122 ntBASIC1.32□□□□□ -2.2
APOBP04114 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
APOBP04114 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
APOBP04114 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
APOBP04114 RNU4-62P-201ENST00000410125 130 ntBASIC1.32□□□□□ -2.2
APOBP04114 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.32□□□□□ -2.2
APOBP04114 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.32□□□□□ -2.2
APOBP04114 AMZ2P1-203ENST00000565833 850 ntBASIC1.32□□□□□ -2.2
APOBP04114 AC093908.1-201ENST00000623125 8092 ntBASIC1.32□□□□□ -2.2
APOBP04114 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
APOBP04114 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
APOBP04114 AC066616.2-201ENST00000559334 1481 ntBASIC1.31□□□□□ -2.2
APOBP04114 MIR1183-201ENST00000408856 89 ntBASIC1.31□□□□□ -2.2
APOBP04114 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.31□□□□□ -2.2
APOBP04114 MIR5089-201ENST00000580047 84 ntBASIC1.31□□□□□ -2.2
APOBP04114 AP004372.1-201ENST00000604842 844 ntBASIC1.31□□□□□ -2.2
APOBP04114 SAR1AP2-201ENST00000392696 594 ntBASIC1.31□□□□□ -2.2
APOBP04114 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.31□□□□□ -2.2
APOBP04114 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.31□□□□□ -2.2
APOBP04114 HMGB1P41-201ENST00000520234 440 ntBASIC1.31□□□□□ -2.2
APOBP04114 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC1.31□□□□□ -2.2
APOBP04114 ELOCP31-201ENST00000540463 467 ntBASIC1.31□□□□□ -2.2
APOBP04114 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.31□□□□□ -2.2
APOBP04114 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.31□□□□□ -2.2
APOBP04114 RMST_2.1-201ENST00000617263 136 ntBASIC1.31□□□□□ -2.2
APOBP04114 AC091046.2-201ENST00000620775 665 ntBASIC1.31□□□□□ -2.2
APOBP04114 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
APOBP04114 AL606537.1-201ENST00000607258 2011 ntBASIC1.31□□□□□ -2.2
APOBP04114 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
APOBP04114 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
APOBP04114 AC009237.8-201ENST00000445492 379 ntBASIC1.31□□□□□ -2.2
APOBP04114 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms