Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DQB1P01920 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DQB1P01920 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.56□□□□□ -2
HLA-DQB1P01920 MTCYBP41-201ENST00000528913 1123 ntBASIC2.56□□□□□ -2
HLA-DQB1P01920 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DQB1P01920 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.56□□□□□ -2
HLA-DQB1P01920 CYB5AP5-201ENST00000549779 389 ntBASIC2.56□□□□□ -2
HLA-DQB1P01920 AL163153.1-201ENST00000554223 283 ntBASIC2.56□□□□□ -2
HLA-DQB1P01920 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.56□□□□□ -2
HLA-DQB1P01920 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.56□□□□□ -2
HLA-DQB1P01920 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
HLA-DQB1P01920 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DQB1P01920 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.56□□□□□ -2
HLA-DQB1P01920 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.56□□□□□ -2
HLA-DQB1P01920 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DQB1P01920 CKS1BP3-201ENST00000600888 237 ntBASIC2.56□□□□□ -2
HLA-DQB1P01920 IGHV3-29-201ENST00000604817 344 ntBASIC2.56□□□□□ -2
HLA-DQB1P01920 AP000238.1-201ENST00000608759 426 ntBASIC2.56□□□□□ -2
HLA-DQB1P01920 BX323046.1-201ENST00000610145 535 ntBASIC2.56□□□□□ -2
HLA-DQB1P01920 CR381572.1-201ENST00000625098 102 ntBASIC2.56□□□□□ -2
HLA-DQB1P01920 POMP-202ENST00000460403 1428 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DQB1P01920 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.56□□□□□ -2
HLA-DQB1P01920 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HLA-DQB1P01920 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DQB1P01920 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
HLA-DQB1P01920 AC110774.1-201ENST00000623567 2018 ntBASIC2.56□□□□□ -2
HLA-DQB1P01920 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.56□□□□□ -2
HLA-DQB1P01920 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.55□□□□□ -2
HLA-DQB1P01920 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HLA-DQB1P01920 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.55□□□□□ -2
HLA-DQB1P01920 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HLA-DQB1P01920 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
HLA-DQB1P01920 RNU6-989P-201ENST00000362756 107 ntBASIC2.55□□□□□ -2
HLA-DQB1P01920 RNU6-263P-201ENST00000363811 107 ntBASIC2.55□□□□□ -2
HLA-DQB1P01920 RNU6-236P-201ENST00000363886 106 ntBASIC2.55□□□□□ -2
HLA-DQB1P01920 RNU1-85P-201ENST00000364127 164 ntBASIC2.55□□□□□ -2
HLA-DQB1P01920 RNU1-33P-201ENST00000364249 162 ntBASIC2.55□□□□□ -2
HLA-DQB1P01920 RNU6-115P-201ENST00000364310 107 ntBASIC2.55□□□□□ -2
HLA-DQB1P01920 RNU1-64P-201ENST00000365443 163 ntBASIC2.55□□□□□ -2
HLA-DQB1P01920 RNU6-1257P-201ENST00000384625 110 ntBASIC2.55□□□□□ -2
HLA-DQB1P01920 SNORD67-201ENST00000390833 111 ntBASIC2.55□□□□□ -2
HLA-DQB1P01920 RPL7P25-201ENST00000404151 721 ntBASIC2.55□□□□□ -2
HLA-DQB1P01920 MIR1250-201ENST00000408098 113 ntBASIC2.55□□□□□ -2
HLA-DQB1P01920 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.55□□□□□ -2
HLA-DQB1P01920 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.55□□□□□ -2
HLA-DQB1P01920 MTCYBP32-201ENST00000427945 1084 ntBASIC2.55□□□□□ -2
HLA-DQB1P01920 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.55□□□□□ -2
HLA-DQB1P01920 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.55□□□□□ -2
HLA-DQB1P01920 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DQB1P01920 HMGN2P20-201ENST00000437531 273 ntBASIC2.55□□□□□ -2
HLA-DQB1P01920 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.55□□□□□ -2
HLA-DQB1P01920 COX6CP18-201ENST00000448769 222 ntBASIC2.55□□□□□ -2
HLA-DQB1P01920 MRPL42P4-201ENST00000453267 443 ntBASIC2.55□□□□□ -2
HLA-DQB1P01920 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.55□□□□□ -2
HLA-DQB1P01920 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.55□□□□□ -2
HLA-DQB1P01920 PRELID3BP5-201ENST00000508612 460 ntBASIC2.55□□□□□ -2
HLA-DQB1P01920 SNORA9.3-201ENST00000516383 129 ntBASIC2.55□□□□□ -2
HLA-DQB1P01920 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.55□□□□□ -2
HLA-DQB1P01920 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.55□□□□□ -2
HLA-DQB1P01920 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.55□□□□□ -2
HLA-DQB1P01920 AL669831.4-202ENST00000590817 238 ntBASIC2.55□□□□□ -2
HLA-DQB1P01920 VN1R87P-201ENST00000596706 487 ntBASIC2.55□□□□□ -2
HLA-DQB1P01920 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.55□□□□□ -2
HLA-DQB1P01920 AP002802.2-201ENST00000605877 235 ntBASIC2.55□□□□□ -2
HLA-DQB1P01920 AC090116.1-201ENST00000615679 446 ntBASIC2.55□□□□□ -2
HLA-DQB1P01920 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HLA-DQB1P01920 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.55□□□□□ -2
HLA-DQB1P01920 AL355493.4-201ENST00000618530 292 ntBASIC2.55□□□□□ -2
HLA-DQB1P01920 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.55□□□□□ -2
HLA-DQB1P01920 AC010297.1-201ENST00000623948 149 ntBASIC2.55□□□□□ -2
HLA-DQB1P01920 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.55□□□□□ -2
HLA-DQB1P01920 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DQB1P01920 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
HLA-DQB1P01920 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.55□□□□□ -2
HLA-DQB1P01920 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.54□□□□□ -2
HLA-DQB1P01920 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HLA-DQB1P01920 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.54□□□□□ -2
HLA-DQB1P01920 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.54□□□□□ -2
HLA-DQB1P01920 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.54□□□□□ -2
HLA-DQB1P01920 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.54□□□□□ -2
HLA-DQB1P01920 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.54□□□□□ -2
HLA-DQB1P01920 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HLA-DQB1P01920 RNA5SP479-201ENST00000364858 117 ntBASIC2.54□□□□□ -2
HLA-DQB1P01920 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
HLA-DQB1P01920 SNORD21-201ENST00000383953 95 ntBASIC2.54□□□□□ -2
HLA-DQB1P01920 SNORA7.4-201ENST00000384249 137 ntBASIC2.54□□□□□ -2
HLA-DQB1P01920 MIR490-201ENST00000384865 128 ntBASIC2.54□□□□□ -2
HLA-DQB1P01920 MIR554-201ENST00000384874 96 ntBASIC2.54□□□□□ -2
HLA-DQB1P01920 AL603865.2-201ENST00000401679 213 ntBASIC2.54□□□□□ -2
HLA-DQB1P01920 MTND4LP20-201ENST00000402379 270 ntBASIC2.54□□□□□ -2
HLA-DQB1P01920 AL138880.1-201ENST00000405824 642 ntBASIC2.54□□□□□ -2
HLA-DQB1P01920 RNU2-71P-201ENST00000411395 189 ntBASIC2.54□□□□□ -2
HLA-DQB1P01920 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.54□□□□□ -2
HLA-DQB1P01920 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DQB1P01920 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DQB1P01920 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.54□□□□□ -2
HLA-DQB1P01920 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DQB1P01920 AC091286.1-201ENST00000431233 461 ntBASIC2.54□□□□□ -2
HLA-DQB1P01920 HMGN2P31-201ENST00000432430 273 ntBASIC2.54□□□□□ -2
HLA-DQB1P01920 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms