Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CPSF4O95639 ATP5F1P6-201ENST00000402768 767 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 BTBD10P2-201ENST00000404779 676 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.4□□□□□ -2.03
CPSF4O95639 AP000567.1-201ENST00000406413 156 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CPSF4O95639 RNA5SP181-201ENST00000410246 98 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 AC080125.1-201ENST00000414888 684 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 AC008173.1-201ENST00000418901 264 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.4□□□□□ -2.03
CPSF4O95639 CKS1BP5-201ENST00000434172 273 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 AL590103.1-201ENST00000434488 307 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 AC006994.1-201ENST00000438212 839 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 AC105272.1-201ENST00000438604 198 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 AC000041.1-201ENST00000439655 175 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 MTND1P33-201ENST00000446251 917 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC2.4□□□□□ -2.03
CPSF4O95639 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.4□□□□□ -2.03
CPSF4O95639 SLC31A1P1-201ENST00000451221 567 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.4□□□□□ -2.03
CPSF4O95639 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.4□□□□□ -2.03
CPSF4O95639 AC133134.1-201ENST00000466800 359 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.4□□□□□ -2.03
CPSF4O95639 MTND3P24-201ENST00000506306 329 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.4□□□□□ -2.03
CPSF4O95639 AC093755.1-201ENST00000512950 1023 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 AC096725.1-201ENST00000514266 313 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 HMGB1P41-201ENST00000520234 440 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.4□□□□□ -2.03
CPSF4O95639 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.4□□□□□ -2.03
CPSF4O95639 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.4□□□□□ -2.03
CPSF4O95639 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.4□□□□□ -2.03
CPSF4O95639 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.4□□□□□ -2.03
CPSF4O95639 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.4□□□□□ -2.03
CPSF4O95639 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.4□□□□□ -2.03
CPSF4O95639 AC005951.1-201ENST00000576706 485 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 AC007619.2-201ENST00000605743 379 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 AC016877.3-201ENST00000606778 504 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 VN1R9P-201ENST00000614184 867 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.4□□□□□ -2.03
CPSF4O95639 AL356118.1-201ENST00000635272 1078 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 AC132825.7-201ENST00000638744 335 ntBASIC2.4□□□□□ -2.03
CPSF4O95639 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
CPSF4O95639 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.4□□□□□ -2.03
CPSF4O95639 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.4□□□□□ -2.03
CPSF4O95639 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CPSF4O95639 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CPSF4O95639 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CPSF4O95639 AL672167.1-206ENST00000356293 943 ntBASIC2.39□□□□□ -2.03
CPSF4O95639 SNORA25.6-201ENST00000364121 118 ntBASIC2.39□□□□□ -2.03
CPSF4O95639 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CPSF4O95639 AL162578.1-201ENST00000406202 378 ntBASIC2.39□□□□□ -2.03
CPSF4O95639 PTGES3P2-201ENST00000407942 482 ntBASIC2.39□□□□□ -2.03
CPSF4O95639 USP9YP19-201ENST00000412165 485 ntBASIC2.39□□□□□ -2.03
CPSF4O95639 AL606495.1-201ENST00000422100 813 ntBASIC2.39□□□□□ -2.03
CPSF4O95639 AC241520.1-201ENST00000422654 1099 ntBASIC2.39□□□□□ -2.03
CPSF4O95639 RPL7P44-201ENST00000424827 742 ntBASIC2.39□□□□□ -2.03
CPSF4O95639 AL513175.1-201ENST00000431492 780 ntBASIC2.39□□□□□ -2.03
CPSF4O95639 HMGB1P45-201ENST00000435986 653 ntBASIC2.39□□□□□ -2.03
CPSF4O95639 RPL7P55-201ENST00000450522 746 ntBASIC2.39□□□□□ -2.03
CPSF4O95639 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CPSF4O95639 KC877373.1-201ENST00000479066 408 ntBASIC2.39□□□□□ -2.03
CPSF4O95639 AC006483.1-201ENST00000487308 313 ntBASIC2.39□□□□□ -2.03
CPSF4O95639 RPS27P27-201ENST00000498779 255 ntBASIC2.39□□□□□ -2.03
CPSF4O95639 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CPSF4O95639 AC034159.1-201ENST00000513885 583 ntBASIC2.39□□□□□ -2.03
CPSF4O95639 AC016065.2-201ENST00000514530 444 ntBASIC2.39□□□□□ -2.03
CPSF4O95639 RN7SKP132-201ENST00000516001 208 ntBASIC2.39□□□□□ -2.03
CPSF4O95639 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.39□□□□□ -2.03
CPSF4O95639 RPL12P22-201ENST00000519073 490 ntBASIC2.39□□□□□ -2.03
CPSF4O95639 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.39□□□□□ -2.03
CPSF4O95639 AF279873.1-201ENST00000523393 313 ntBASIC2.39□□□□□ -2.03
CPSF4O95639 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.39□□□□□ -2.03
CPSF4O95639 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.39□□□□□ -2.03
CPSF4O95639 SYF2P1-201ENST00000550658 413 ntBASIC2.39□□□□□ -2.03
CPSF4O95639 EIF5A2P1-201ENST00000564027 460 ntBASIC2.39□□□□□ -2.03
CPSF4O95639 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.39□□□□□ -2.03
CPSF4O95639 VN1R90P-201ENST00000595717 726 ntBASIC2.39□□□□□ -2.03
CPSF4O95639 YWHAQP7-201ENST00000603536 658 ntBASIC2.39□□□□□ -2.03
CPSF4O95639 AC022079.2-201ENST00000619739 566 ntBASIC2.39□□□□□ -2.03
CPSF4O95639 AC073592.7-201ENST00000623659 507 ntBASIC2.39□□□□□ -2.03
CPSF4O95639 AL109659.3-201ENST00000624985 950 ntBASIC2.39□□□□□ -2.03
CPSF4O95639 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CPSF4O95639 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
CPSF4O95639 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CPSF4O95639 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CPSF4O95639 AL360182.1-201ENST00000397433 468 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 DSTNP4-201ENST00000399472 474 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 RNU6-272P-201ENST00000411028 104 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.38□□□□□ -2.03
CPSF4O95639 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.38□□□□□ -2.03
CPSF4O95639 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.38□□□□□ -2.03
CPSF4O95639 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
CPSF4O95639 OR51AB1P-201ENST00000429046 620 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 RPL36P19-201ENST00000430744 301 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 RPL17P35-201ENST00000432217 549 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.38□□□□□ -2.03
CPSF4O95639 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.38□□□□□ -2.03
CPSF4O95639 AC098826.1-201ENST00000433943 471 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms