Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CNOT4O95628 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.66
CNOT4O95628 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.65□□□□□ -1.66
CNOT4O95628 AC006020.1-201ENST00000420179 1854 ntBASIC4.65□□□□□ -1.66
CNOT4O95628 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
CNOT4O95628 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.65□□□□□ -1.67
CNOT4O95628 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CNOT4O95628 U3.2-201ENST00000362981 210 ntBASIC4.65□□□□□ -1.67
CNOT4O95628 Y_RNA.255-201ENST00000364581 97 ntBASIC4.65□□□□□ -1.67
CNOT4O95628 SNORA51.6-201ENST00000384151 125 ntBASIC4.65□□□□□ -1.67
CNOT4O95628 AL080315.1-201ENST00000406055 466 ntBASIC4.65□□□□□ -1.67
CNOT4O95628 RPL26P29-201ENST00000415623 438 ntBASIC4.65□□□□□ -1.67
CNOT4O95628 MTCYBP8-201ENST00000422855 651 ntBASIC4.65□□□□□ -1.67
CNOT4O95628 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.65□□□□□ -1.67
CNOT4O95628 AC006548.1-201ENST00000427470 102 ntBASIC4.65□□□□□ -1.67
CNOT4O95628 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.65□□□□□ -1.67
CNOT4O95628 RPL7AP49-201ENST00000429522 581 ntBASIC4.65□□□□□ -1.67
CNOT4O95628 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.65□□□□□ -1.67
CNOT4O95628 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.65□□□□□ -1.67
CNOT4O95628 AL591438.1-201ENST00000433508 581 ntBASIC4.65□□□□□ -1.67
CNOT4O95628 HMGB1P18-201ENST00000438801 619 ntBASIC4.65□□□□□ -1.67
CNOT4O95628 AL049734.2-201ENST00000441066 616 ntBASIC4.65□□□□□ -1.67
CNOT4O95628 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.65□□□□□ -1.67
CNOT4O95628 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CNOT4O95628 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.65□□□□□ -1.67
CNOT4O95628 SNORD19B-201ENST00000459623 84 ntBASIC4.65□□□□□ -1.67
CNOT4O95628 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.65□□□□□ -1.67
CNOT4O95628 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CNOT4O95628 TMEM248P1-201ENST00000510579 951 ntBASIC4.65□□□□□ -1.67
CNOT4O95628 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.65□□□□□ -1.67
CNOT4O95628 AC006427.1-201ENST00000514359 712 ntBASIC4.65□□□□□ -1.67
CNOT4O95628 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.65□□□□□ -1.67
CNOT4O95628 IGKV2D-36-201ENST00000518643 226 ntBASIC4.65□□□□□ -1.67
CNOT4O95628 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.65□□□□□ -1.67
CNOT4O95628 SUB1P1-201ENST00000524415 382 ntBASIC4.65□□□□□ -1.67
CNOT4O95628 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.65□□□□□ -1.67
CNOT4O95628 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CNOT4O95628 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.65□□□□□ -1.67
CNOT4O95628 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.65□□□□□ -1.67
CNOT4O95628 AL356432.3-201ENST00000568952 465 ntBASIC4.65□□□□□ -1.67
CNOT4O95628 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.65□□□□□ -1.67
CNOT4O95628 MIR3171-201ENST00000584270 74 ntBASIC4.65□□□□□ -1.67
CNOT4O95628 AL353997.4-201ENST00000586196 166 ntBASIC4.65□□□□□ -1.67
CNOT4O95628 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.65□□□□□ -1.67
CNOT4O95628 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.65□□□□□ -1.67
CNOT4O95628 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.65□□□□□ -1.67
CNOT4O95628 AL391813.2-201ENST00000609113 322 ntBASIC4.65□□□□□ -1.67
CNOT4O95628 EIF3FP1-201ENST00000613970 806 ntBASIC4.65□□□□□ -1.67
CNOT4O95628 AC079684.1-201ENST00000621405 437 ntBASIC4.65□□□□□ -1.67
CNOT4O95628 CR381572.1-201ENST00000625098 102 ntBASIC4.65□□□□□ -1.67
CNOT4O95628 CYP4F35P-202ENST00000636121 390 ntBASIC4.65□□□□□ -1.67
CNOT4O95628 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CNOT4O95628 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
CNOT4O95628 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.65□□□□□ -1.67
CNOT4O95628 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
CNOT4O95628 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CNOT4O95628 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.65□□□□□ -1.67
CNOT4O95628 NEAT1-202ENST00000501122 22743 ntBASIC4.64□□□□□ -1.67
CNOT4O95628 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CNOT4O95628 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CNOT4O95628 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CNOT4O95628 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CNOT4O95628 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
CNOT4O95628 SNORA73.1-201ENST00000363107 205 ntBASIC4.64□□□□□ -1.67
CNOT4O95628 SNORA63C-201ENST00000364578 129 ntBASIC4.64□□□□□ -1.67
CNOT4O95628 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CNOT4O95628 Y_RNA.387-201ENST00000383918 102 ntBASIC4.64□□□□□ -1.67
CNOT4O95628 MIR1-2-201ENST00000384961 85 ntBASIC4.64□□□□□ -1.67
CNOT4O95628 AL109941.1-201ENST00000401925 229 ntBASIC4.64□□□□□ -1.67
CNOT4O95628 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.64□□□□□ -1.67
CNOT4O95628 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.64□□□□□ -1.67
CNOT4O95628 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.64□□□□□ -1.67
CNOT4O95628 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CNOT4O95628 AC079781.2-201ENST00000446424 169 ntBASIC4.64□□□□□ -1.67
CNOT4O95628 AC104634.1-201ENST00000452720 462 ntBASIC4.64□□□□□ -1.67
CNOT4O95628 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.64□□□□□ -1.67
CNOT4O95628 AC130509.1-201ENST00000464158 433 ntBASIC4.64□□□□□ -1.67
CNOT4O95628 PLGLA-201ENST00000465668 449 ntBASIC4.64□□□□□ -1.67
CNOT4O95628 AC022034.3-201ENST00000471393 478 ntBASIC4.64□□□□□ -1.67
CNOT4O95628 RN7SL346P-201ENST00000491561 294 ntBASIC4.64□□□□□ -1.67
CNOT4O95628 AC093767.1-201ENST00000504523 156 ntBASIC4.64□□□□□ -1.67
CNOT4O95628 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.64□□□□□ -1.67
CNOT4O95628 AC007016.1-201ENST00000512110 244 ntBASIC4.64□□□□□ -1.67
CNOT4O95628 HMGN1P9-201ENST00000515212 298 ntBASIC4.64□□□□□ -1.67
CNOT4O95628 RNU4-49P-201ENST00000516080 140 ntBASIC4.64□□□□□ -1.67
CNOT4O95628 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.64□□□□□ -1.67
CNOT4O95628 HMGB1P19-201ENST00000517578 577 ntBASIC4.64□□□□□ -1.67
CNOT4O95628 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.64□□□□□ -1.67
CNOT4O95628 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.64□□□□□ -1.67
CNOT4O95628 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.64□□□□□ -1.67
CNOT4O95628 OR4T1P-201ENST00000554933 911 ntBASIC4.64□□□□□ -1.67
CNOT4O95628 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.64□□□□□ -1.67
CNOT4O95628 AL355812.1-201ENST00000603215 216 ntBASIC4.64□□□□□ -1.67
CNOT4O95628 AC021646.1-201ENST00000605469 484 ntBASIC4.64□□□□□ -1.67
CNOT4O95628 AC010632.3-201ENST00000611377 369 ntBASIC4.64□□□□□ -1.67
CNOT4O95628 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.64□□□□□ -1.67
CNOT4O95628 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
CNOT4O95628 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CNOT4O95628 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CNOT4O95628 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms