Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VAPBO95292 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.87□□□□□ -1.95
VAPBO95292 AC092170.1-201ENST00000440211 356 ntBASIC2.87□□□□□ -1.95
VAPBO95292 COX6CP2-201ENST00000444980 225 ntBASIC2.87□□□□□ -1.95
VAPBO95292 AC112492.1-201ENST00000449607 712 ntBASIC2.87□□□□□ -1.95
VAPBO95292 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.87□□□□□ -1.95
VAPBO95292 AC104472.2-201ENST00000469035 601 ntBASIC2.87□□□□□ -1.95
VAPBO95292 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.87□□□□□ -1.95
VAPBO95292 MLLT10P2-201ENST00000506434 249 ntBASIC2.87□□□□□ -1.95
VAPBO95292 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VAPBO95292 SNORA31.1-201ENST00000515993 133 ntBASIC2.87□□□□□ -1.95
VAPBO95292 SNORA31.5-201ENST00000516190 133 ntBASIC2.87□□□□□ -1.95
VAPBO95292 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.87□□□□□ -1.95
VAPBO95292 AP001804.3-201ENST00000525146 880 ntBASIC2.87□□□□□ -1.95
VAPBO95292 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.87□□□□□ -1.95
VAPBO95292 MTCO3P13-201ENST00000577757 781 ntBASIC2.87□□□□□ -1.95
VAPBO95292 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.87□□□□□ -1.95
VAPBO95292 BNIP3P4-201ENST00000604946 565 ntBASIC2.87□□□□□ -1.95
VAPBO95292 AC021851.1-201ENST00000608537 1082 ntBASIC2.87□□□□□ -1.95
VAPBO95292 AL392048.1-201ENST00000613946 534 ntBASIC2.87□□□□□ -1.95
VAPBO95292 AL355493.4-201ENST00000618530 292 ntBASIC2.87□□□□□ -1.95
VAPBO95292 AC073968.1-201ENST00000618594 637 ntBASIC2.87□□□□□ -1.95
VAPBO95292 MIR8057-201ENST00000620957 69 ntBASIC2.87□□□□□ -1.95
VAPBO95292 MIR3651-201ENST00000630427 90 ntBASIC2.87□□□□□ -1.95
VAPBO95292 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
VAPBO95292 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VAPBO95292 SGO1P2-201ENST00000429458 1589 ntBASIC2.87□□□□□ -1.95
VAPBO95292 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
VAPBO95292 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VAPBO95292 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
VAPBO95292 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VAPBO95292 MIR649-201ENST00000384843 97 ntBASIC2.86□□□□□ -1.95
VAPBO95292 RPL5P18-201ENST00000406671 891 ntBASIC2.86□□□□□ -1.95
VAPBO95292 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VAPBO95292 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.86□□□□□ -1.95
VAPBO95292 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.86□□□□□ -1.95
VAPBO95292 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.86□□□□□ -1.95
VAPBO95292 RPP40P1-201ENST00000426762 456 ntBASIC2.86□□□□□ -1.95
VAPBO95292 AC127537.2-201ENST00000439258 465 ntBASIC2.86□□□□□ -1.95
VAPBO95292 MTCYBP34-201ENST00000439552 670 ntBASIC2.86□□□□□ -1.95
VAPBO95292 RPL21P2-201ENST00000440049 481 ntBASIC2.86□□□□□ -1.95
VAPBO95292 RPS26P30-201ENST00000443431 335 ntBASIC2.86□□□□□ -1.95
VAPBO95292 AP001992.1-205ENST00000462248 379 ntBASIC2.86□□□□□ -1.95
VAPBO95292 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.86□□□□□ -1.95
VAPBO95292 SNORA31.26-201ENST00000517250 137 ntBASIC2.86□□□□□ -1.95
VAPBO95292 AC004217.3-201ENST00000551552 878 ntBASIC2.86□□□□□ -1.95
VAPBO95292 LSM6P2-201ENST00000552208 177 ntBASIC2.86□□□□□ -1.95
VAPBO95292 AC095057.3-201ENST00000567102 1157 ntBASIC2.86□□□□□ -1.95
VAPBO95292 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.86□□□□□ -1.95
VAPBO95292 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.86□□□□□ -1.95
VAPBO95292 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.86□□□□□ -1.95
VAPBO95292 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.86□□□□□ -1.95
VAPBO95292 AC096586.1-201ENST00000610267 561 ntBASIC2.86□□□□□ -1.95
VAPBO95292 AC096577.2-201ENST00000611455 153 ntBASIC2.86□□□□□ -1.95
VAPBO95292 AL355810.1-201ENST00000614629 552 ntBASIC2.86□□□□□ -1.95
VAPBO95292 ATP5A1P2-202ENST00000616464 443 ntBASIC2.86□□□□□ -1.95
VAPBO95292 CYCSP41-201ENST00000616920 296 ntBASIC2.86□□□□□ -1.95
VAPBO95292 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.86□□□□□ -1.95
VAPBO95292 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VAPBO95292 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
VAPBO95292 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.86□□□□□ -1.95
VAPBO95292 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.86□□□□□ -1.95
VAPBO95292 AC093010.3-201ENST00000570269 15214 ntBASIC2.86□□□□□ -1.95
VAPBO95292 AC244517.1-201ENST00000606030 2086 ntBASIC2.86□□□□□ -1.95
VAPBO95292 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VAPBO95292 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
VAPBO95292 AC025263.3-201ENST00000622965 1396 ntBASIC2.86□□□□□ -1.95
VAPBO95292 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
VAPBO95292 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VAPBO95292 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.85□□□□□ -1.95
VAPBO95292 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
VAPBO95292 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VAPBO95292 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
VAPBO95292 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VAPBO95292 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VAPBO95292 RNU6-851P-201ENST00000384565 107 ntBASIC2.85□□□□□ -1.95
VAPBO95292 AL024507.1-201ENST00000412741 274 ntBASIC2.85□□□□□ -1.95
VAPBO95292 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.85□□□□□ -1.95
VAPBO95292 FNDC3CP-201ENST00000420795 1155 ntBASIC2.85□□□□□ -1.95
VAPBO95292 AC233981.1-201ENST00000423224 461 ntBASIC2.85□□□□□ -1.95
VAPBO95292 TRIM60P13-201ENST00000432350 1283 ntBASIC2.85□□□□□ -1.95
VAPBO95292 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.85□□□□□ -1.95
VAPBO95292 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.85□□□□□ -1.95
VAPBO95292 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.85□□□□□ -1.95
VAPBO95292 MTND3P4-201ENST00000453537 303 ntBASIC2.85□□□□□ -1.95
VAPBO95292 RNU6-775P-201ENST00000459318 96 ntBASIC2.85□□□□□ -1.95
VAPBO95292 RN7SL499P-201ENST00000481141 276 ntBASIC2.85□□□□□ -1.95
VAPBO95292 DYNLL1P6-201ENST00000503440 264 ntBASIC2.85□□□□□ -1.95
VAPBO95292 AC111000.2-201ENST00000507775 550 ntBASIC2.85□□□□□ -1.95
VAPBO95292 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VAPBO95292 GMPSP1-201ENST00000514075 579 ntBASIC2.85□□□□□ -1.95
VAPBO95292 RNA5SP341-201ENST00000516261 117 ntBASIC2.85□□□□□ -1.95
VAPBO95292 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.85□□□□□ -1.95
VAPBO95292 SNRPGP16-201ENST00000533275 226 ntBASIC2.85□□□□□ -1.95
VAPBO95292 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.85□□□□□ -1.95
VAPBO95292 HPRT1P3-201ENST00000539521 576 ntBASIC2.85□□□□□ -1.95
VAPBO95292 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.85□□□□□ -1.95
VAPBO95292 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.85□□□□□ -1.95
VAPBO95292 AC023043.3-201ENST00000593113 385 ntBASIC2.85□□□□□ -1.95
VAPBO95292 AP001330.4-201ENST00000604350 154 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms