Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.16□□□□□ -2.06
SNRNP200O75643 AC004263.1-201ENST00000479327 332 ntBASIC2.16□□□□□ -2.06
SNRNP200O75643 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SNRNP200O75643 AC093755.1-201ENST00000512950 1023 ntBASIC2.16□□□□□ -2.06
SNRNP200O75643 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.16□□□□□ -2.06
SNRNP200O75643 EIF5A2P1-201ENST00000564027 460 ntBASIC2.16□□□□□ -2.06
SNRNP200O75643 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.16□□□□□ -2.06
SNRNP200O75643 AL161912.3-201ENST00000605404 628 ntBASIC2.16□□□□□ -2.06
SNRNP200O75643 AP003117.2-201ENST00000606010 545 ntBASIC2.16□□□□□ -2.06
SNRNP200O75643 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
SNRNP200O75643 OR5H15-201ENST00000383696 930 ntBASIC2.15□□□□□ -2.06
SNRNP200O75643 ATF1P1-201ENST00000406040 927 ntBASIC2.15□□□□□ -2.06
SNRNP200O75643 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.15□□□□□ -2.06
SNRNP200O75643 AL035407.1-201ENST00000429211 571 ntBASIC2.15□□□□□ -2.06
SNRNP200O75643 CR769767.1-201ENST00000436337 346 ntBASIC2.15□□□□□ -2.06
SNRNP200O75643 XKRYP6-201ENST00000440468 1116 ntBASIC2.15□□□□□ -2.06
SNRNP200O75643 XKRYP3-201ENST00000442113 1116 ntBASIC2.15□□□□□ -2.06
SNRNP200O75643 RPL9P6-201ENST00000492764 598 ntBASIC2.15□□□□□ -2.06
SNRNP200O75643 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.15□□□□□ -2.06
SNRNP200O75643 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.15□□□□□ -2.06
SNRNP200O75643 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.15□□□□□ -2.06
SNRNP200O75643 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.15□□□□□ -2.06
SNRNP200O75643 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
SNRNP200O75643 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC2.15□□□□□ -2.06
SNRNP200O75643 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.15□□□□□ -2.06
SNRNP200O75643 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.15□□□□□ -2.06
SNRNP200O75643 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC2.15□□□□□ -2.06
SNRNP200O75643 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.15□□□□□ -2.06
SNRNP200O75643 AC008432.1-201ENST00000615912 1320 ntBASIC2.15□□□□□ -2.06
SNRNP200O75643 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
SNRNP200O75643 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
SNRNP200O75643 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
SNRNP200O75643 U8.2-201ENST00000363156 134 ntBASIC2.15□□□□□ -2.07
SNRNP200O75643 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SNRNP200O75643 TRIM60P18-201ENST00000441518 828 ntBASIC2.15□□□□□ -2.07
SNRNP200O75643 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.15□□□□□ -2.07
SNRNP200O75643 OR7L1P-201ENST00000456181 380 ntBASIC2.15□□□□□ -2.07
SNRNP200O75643 AC089999.1-201ENST00000460336 374 ntBASIC2.15□□□□□ -2.07
SNRNP200O75643 GTF2IP9-201ENST00000502460 301 ntBASIC2.15□□□□□ -2.07
SNRNP200O75643 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC2.15□□□□□ -2.07
SNRNP200O75643 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.15□□□□□ -2.07
SNRNP200O75643 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.15□□□□□ -2.07
SNRNP200O75643 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.15□□□□□ -2.07
SNRNP200O75643 MIR5007-201ENST00000583098 95 ntBASIC2.15□□□□□ -2.07
SNRNP200O75643 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SNRNP200O75643 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC2.15□□□□□ -2.07
SNRNP200O75643 AC004925.1-201ENST00000624256 2706 ntBASIC2.14□□□□□ -2.07
SNRNP200O75643 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SNRNP200O75643 RNU1-138P-201ENST00000384093 164 ntBASIC2.14□□□□□ -2.07
SNRNP200O75643 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.14□□□□□ -2.07
SNRNP200O75643 HMGN2P21-201ENST00000447764 270 ntBASIC2.14□□□□□ -2.07
SNRNP200O75643 AC021205.1-201ENST00000468797 348 ntBASIC2.14□□□□□ -2.07
SNRNP200O75643 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.14□□□□□ -2.07
SNRNP200O75643 AC026412.2-201ENST00000512270 1075 ntBASIC2.14□□□□□ -2.07
SNRNP200O75643 RN7SKP82-201ENST00000516786 223 ntBASIC2.14□□□□□ -2.07
SNRNP200O75643 AP003467.2-201ENST00000520175 319 ntBASIC2.14□□□□□ -2.07
SNRNP200O75643 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.14□□□□□ -2.07
SNRNP200O75643 AADACP1-206ENST00000561502 1193 ntBASIC2.14□□□□□ -2.07
SNRNP200O75643 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.14□□□□□ -2.07
SNRNP200O75643 HSPE1P14-201ENST00000605812 302 ntBASIC2.14□□□□□ -2.07
SNRNP200O75643 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.14□□□□□ -2.07
SNRNP200O75643 AC104454.1-201ENST00000421341 1401 ntBASIC2.14□□□□□ -2.07
SNRNP200O75643 AL034374.1-201ENST00000406329 351 ntBASIC2.14□□□□□ -2.07
SNRNP200O75643 AL031736.2-201ENST00000426573 787 ntBASIC2.14□□□□□ -2.07
SNRNP200O75643 USP9YP8-201ENST00000441913 500 ntBASIC2.14□□□□□ -2.07
SNRNP200O75643 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.14□□□□□ -2.07
SNRNP200O75643 UBE2V2P4-201ENST00000447495 259 ntBASIC2.14□□□□□ -2.07
SNRNP200O75643 RN7SL429P-201ENST00000479090 223 ntBASIC2.14□□□□□ -2.07
SNRNP200O75643 RN7SL489P-201ENST00000486185 223 ntBASIC2.14□□□□□ -2.07
SNRNP200O75643 RN7SL327P-201ENST00000488659 223 ntBASIC2.14□□□□□ -2.07
SNRNP200O75643 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.14□□□□□ -2.07
SNRNP200O75643 RNA5SP402-201ENST00000517148 110 ntBASIC2.14□□□□□ -2.07
SNRNP200O75643 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.14□□□□□ -2.07
SNRNP200O75643 AP002770.2-201ENST00000543613 532 ntBASIC2.14□□□□□ -2.07
SNRNP200O75643 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.14□□□□□ -2.07
SNRNP200O75643 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.14□□□□□ -2.07
SNRNP200O75643 RN7SL853P-201ENST00000617250 223 ntBASIC2.14□□□□□ -2.07
SNRNP200O75643 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.14□□□□□ -2.07
SNRNP200O75643 MIR1291-201ENST00000627649 87 ntBASIC2.14□□□□□ -2.07
SNRNP200O75643 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
SNRNP200O75643 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.13□□□□□ -2.07
SNRNP200O75643 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SNRNP200O75643 MIR142-201ENST00000384835 87 ntBASIC2.13□□□□□ -2.07
SNRNP200O75643 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.13□□□□□ -2.07
SNRNP200O75643 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.13□□□□□ -2.07
SNRNP200O75643 AC005189.1-201ENST00000431286 310 ntBASIC2.13□□□□□ -2.07
SNRNP200O75643 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
SNRNP200O75643 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.13□□□□□ -2.07
SNRNP200O75643 AC006445.2-201ENST00000510061 472 ntBASIC2.13□□□□□ -2.07
SNRNP200O75643 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.13□□□□□ -2.07
SNRNP200O75643 MTCYBP20-201ENST00000524239 1129 ntBASIC2.13□□□□□ -2.07
SNRNP200O75643 YWHAZP1-201ENST00000556286 722 ntBASIC2.13□□□□□ -2.07
SNRNP200O75643 VN1R81P-201ENST00000602085 372 ntBASIC2.13□□□□□ -2.07
SNRNP200O75643 AL133393.1-201ENST00000603277 287 ntBASIC2.13□□□□□ -2.07
SNRNP200O75643 AC019159.1-201ENST00000605094 187 ntBASIC2.13□□□□□ -2.07
SNRNP200O75643 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.13□□□□□ -2.07
SNRNP200O75643 AC112503.1-201ENST00000608436 391 ntBASIC2.13□□□□□ -2.07
SNRNP200O75643 AC107294.1-201ENST00000609524 467 ntBASIC2.13□□□□□ -2.07
SNRNP200O75643 AL356266.1-201ENST00000623311 483 ntBASIC2.13□□□□□ -2.07
SNRNP200O75643 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms