Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.55□□□□□ -1.36
RNF40O75150 RPS3P2-201ENST00000421346 701 ntBASIC6.55□□□□□ -1.36
RNF40O75150 OR4C10P-201ENST00000434991 931 ntBASIC6.55□□□□□ -1.36
RNF40O75150 NOP56P2-201ENST00000447491 769 ntBASIC6.55□□□□□ -1.36
RNF40O75150 UBA52P7-201ENST00000486088 380 ntBASIC6.55□□□□□ -1.36
RNF40O75150 AL359273.1-201ENST00000510918 627 ntBASIC6.55□□□□□ -1.36
RNF40O75150 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.55□□□□□ -1.36
RNF40O75150 SERF1AP1-201ENST00000514575 187 ntBASIC6.55□□□□□ -1.36
RNF40O75150 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC6.55□□□□□ -1.36
RNF40O75150 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.55□□□□□ -1.36
RNF40O75150 OR10G5P-201ENST00000532733 358 ntBASIC6.55□□□□□ -1.36
RNF40O75150 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC6.55□□□□□ -1.36
RNF40O75150 MIR3189-201ENST00000578735 73 ntBASIC6.55□□□□□ -1.36
RNF40O75150 MIR4300-201ENST00000581016 96 ntBASIC6.55□□□□□ -1.36
RNF40O75150 RN7SL475P-201ENST00000583379 298 ntBASIC6.55□□□□□ -1.36
RNF40O75150 AC008507.3-201ENST00000585753 472 ntBASIC6.55□□□□□ -1.36
RNF40O75150 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.55□□□□□ -1.36
RNF40O75150 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6.55□□□□□ -1.36
RNF40O75150 AL590240.4-201ENST00000616908 390 ntBASIC6.55□□□□□ -1.36
RNF40O75150 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
RNF40O75150 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RNF40O75150 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RNF40O75150 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.55□□□□□ -1.36
RNF40O75150 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF40O75150 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF40O75150 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
RNF40O75150 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
RNF40O75150 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF40O75150 AC093671.1-201ENST00000624981 2929 ntBASIC6.54□□□□□ -1.36
RNF40O75150 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF40O75150 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RNF40O75150 Y_RNA.76-201ENST00000362931 109 ntBASIC6.54□□□□□ -1.36
RNF40O75150 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RNF40O75150 RNU6-1293P-201ENST00000384077 107 ntBASIC6.54□□□□□ -1.36
RNF40O75150 Y_RNA.458-201ENST00000384240 102 ntBASIC6.54□□□□□ -1.36
RNF40O75150 MIR628-201ENST00000385229 95 ntBASIC6.54□□□□□ -1.36
RNF40O75150 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.54□□□□□ -1.36
RNF40O75150 AC097463.1-201ENST00000447288 481 ntBASIC6.54□□□□□ -1.36
RNF40O75150 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RNF40O75150 GAPDHP27-201ENST00000447427 1020 ntBASIC6.54□□□□□ -1.36
RNF40O75150 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.54□□□□□ -1.36
RNF40O75150 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.54□□□□□ -1.36
RNF40O75150 AC004453.1-201ENST00000487895 408 ntBASIC6.54□□□□□ -1.36
RNF40O75150 RPL7P23-201ENST00000493874 747 ntBASIC6.54□□□□□ -1.36
RNF40O75150 LSM3P4-201ENST00000502948 309 ntBASIC6.54□□□□□ -1.36
RNF40O75150 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.54□□□□□ -1.36
RNF40O75150 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.54□□□□□ -1.36
RNF40O75150 IGKV3D-25-201ENST00000519599 235 ntBASIC6.54□□□□□ -1.36
RNF40O75150 AC104576.1-201ENST00000524225 88 ntBASIC6.54□□□□□ -1.36
RNF40O75150 TPRX1P1-201ENST00000557620 319 ntBASIC6.54□□□□□ -1.36
RNF40O75150 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF40O75150 MIR5701-3-201ENST00000578890 82 ntBASIC6.54□□□□□ -1.36
RNF40O75150 MIR4701-201ENST00000583094 63 ntBASIC6.54□□□□□ -1.36
RNF40O75150 MIR5701-1-201ENST00000585138 82 ntBASIC6.54□□□□□ -1.36
RNF40O75150 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF40O75150 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF40O75150 AC008521.2-201ENST00000591021 259 ntBASIC6.54□□□□□ -1.36
RNF40O75150 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF40O75150 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.54□□□□□ -1.36
RNF40O75150 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.54□□□□□ -1.36
RNF40O75150 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF40O75150 AC092266.1-201ENST00000610958 165 ntBASIC6.54□□□□□ -1.36
RNF40O75150 AL591516.1-201ENST00000611326 274 ntBASIC6.54□□□□□ -1.36
RNF40O75150 AC005344.1-201ENST00000613391 459 ntBASIC6.54□□□□□ -1.36
RNF40O75150 MIR5701-2-201ENST00000615634 82 ntBASIC6.54□□□□□ -1.36
RNF40O75150 RNU6-156P-201ENST00000621869 107 ntBASIC6.54□□□□□ -1.36
RNF40O75150 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.54□□□□□ -1.36
RNF40O75150 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RNF40O75150 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RNF40O75150 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
RNF40O75150 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF40O75150 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF40O75150 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF40O75150 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF40O75150 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF40O75150 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF40O75150 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF40O75150 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF40O75150 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.53□□□□□ -1.36
RNF40O75150 Y_RNA.8-201ENST00000362353 102 ntBASIC6.53□□□□□ -1.36
RNF40O75150 SNORD82-201ENST00000365530 70 ntBASIC6.53□□□□□ -1.36
RNF40O75150 SNORA51.9-201ENST00000384295 124 ntBASIC6.53□□□□□ -1.36
RNF40O75150 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
RNF40O75150 AL139039.1-201ENST00000401900 692 ntBASIC6.53□□□□□ -1.36
RNF40O75150 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.53□□□□□ -1.36
RNF40O75150 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.53□□□□□ -1.36
RNF40O75150 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.53□□□□□ -1.36
RNF40O75150 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.53□□□□□ -1.36
RNF40O75150 AC091021.1-201ENST00000468051 388 ntBASIC6.53□□□□□ -1.36
RNF40O75150 AF186190.1-201ENST00000517470 480 ntBASIC6.53□□□□□ -1.36
RNF40O75150 AC060775.1-201ENST00000518241 520 ntBASIC6.53□□□□□ -1.36
RNF40O75150 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.53□□□□□ -1.36
RNF40O75150 AC079905.1-201ENST00000549280 475 ntBASIC6.53□□□□□ -1.36
RNF40O75150 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF40O75150 AL158827.2-201ENST00000602494 330 ntBASIC6.53□□□□□ -1.36
RNF40O75150 SNORA74.4-201ENST00000607595 199 ntBASIC6.53□□□□□ -1.36
RNF40O75150 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.53□□□□□ -1.36
RNF40O75150 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF40O75150 RNA5SP439-201ENST00000617595 124 ntBASIC6.53□□□□□ -1.36
RNF40O75150 FAM27E2-201ENST00000619668 403 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms