Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CPNE3O75131 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CPNE3O75131 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CPNE3O75131 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CPNE3O75131 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.39□□□□□ -1.55
CPNE3O75131 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.39□□□□□ -1.55
CPNE3O75131 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CPNE3O75131 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
CPNE3O75131 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.39□□□□□ -1.55
CPNE3O75131 AC006484.1-201ENST00000435086 1884 ntBASIC5.39□□□□□ -1.55
CPNE3O75131 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.39□□□□□ -1.55
CPNE3O75131 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CPNE3O75131 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CPNE3O75131 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CPNE3O75131 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CPNE3O75131 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CPNE3O75131 AL161756.3-201ENST00000641216 2071 ntBASIC5.38□□□□□ -1.55
CPNE3O75131 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CPNE3O75131 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CPNE3O75131 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CPNE3O75131 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.38□□□□□ -1.55
CPNE3O75131 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CPNE3O75131 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CPNE3O75131 Y_RNA.135-201ENST00000363439 95 ntBASIC5.38□□□□□ -1.55
CPNE3O75131 U3.10-201ENST00000364459 214 ntBASIC5.38□□□□□ -1.55
CPNE3O75131 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.38□□□□□ -1.55
CPNE3O75131 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.38□□□□□ -1.55
CPNE3O75131 MIR130A-201ENST00000385274 89 ntBASIC5.38□□□□□ -1.55
CPNE3O75131 SNORA16.2-201ENST00000390991 127 ntBASIC5.38□□□□□ -1.55
CPNE3O75131 RPL21P67-201ENST00000402896 478 ntBASIC5.38□□□□□ -1.55
CPNE3O75131 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CPNE3O75131 PDSS1P1-201ENST00000422953 1114 ntBASIC5.38□□□□□ -1.55
CPNE3O75131 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.38□□□□□ -1.55
CPNE3O75131 AL161722.2-201ENST00000434731 981 ntBASIC5.38□□□□□ -1.55
CPNE3O75131 TXNP1-201ENST00000441872 371 ntBASIC5.38□□□□□ -1.55
CPNE3O75131 OR2AO1P-201ENST00000476497 403 ntBASIC5.38□□□□□ -1.55
CPNE3O75131 VN1R105P-201ENST00000486595 910 ntBASIC5.38□□□□□ -1.55
CPNE3O75131 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.38□□□□□ -1.55
CPNE3O75131 AC008638.1-201ENST00000506035 866 ntBASIC5.38□□□□□ -1.55
CPNE3O75131 AC002456.2-201ENST00000509356 380 ntBASIC5.38□□□□□ -1.55
CPNE3O75131 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.38□□□□□ -1.55
CPNE3O75131 TOMM22P4-201ENST00000511318 336 ntBASIC5.38□□□□□ -1.55
CPNE3O75131 PTP4A1P4-201ENST00000512479 322 ntBASIC5.38□□□□□ -1.55
CPNE3O75131 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.38□□□□□ -1.55
CPNE3O75131 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CPNE3O75131 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.38□□□□□ -1.55
CPNE3O75131 OR7E18P-201ENST00000592589 702 ntBASIC5.38□□□□□ -1.55
CPNE3O75131 IGHV3-29-201ENST00000604817 344 ntBASIC5.38□□□□□ -1.55
CPNE3O75131 AP000654.2-201ENST00000605633 586 ntBASIC5.38□□□□□ -1.55
CPNE3O75131 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.38□□□□□ -1.55
CPNE3O75131 SDR42E1P1-201ENST00000611327 477 ntBASIC5.38□□□□□ -1.55
CPNE3O75131 7SK.10-201ENST00000621414 298 ntBASIC5.38□□□□□ -1.55
CPNE3O75131 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.38□□□□□ -1.55
CPNE3O75131 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
CPNE3O75131 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.38□□□□□ -1.55
CPNE3O75131 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CPNE3O75131 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.38□□□□□ -1.55
CPNE3O75131 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CPNE3O75131 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CPNE3O75131 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CPNE3O75131 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CPNE3O75131 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
CPNE3O75131 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.37□□□□□ -1.55
CPNE3O75131 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CPNE3O75131 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CPNE3O75131 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
CPNE3O75131 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CPNE3O75131 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
CPNE3O75131 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CPNE3O75131 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CPNE3O75131 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.37□□□□□ -1.55
CPNE3O75131 Y_RNA.133-201ENST00000363428 110 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 RNU6-393P-201ENST00000384475 107 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 SNORA70E-201ENST00000384492 135 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 RNU6-310P-201ENST00000384655 107 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 RNU6-1105P-201ENST00000384774 107 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CPNE3O75131 AL391417.1-201ENST00000404100 426 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 AL121834.1-202ENST00000404494 277 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 MIR1178-201ENST00000408396 91 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.37□□□□□ -1.55
CPNE3O75131 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.37□□□□□ -1.55
CPNE3O75131 MRPS18BP2-201ENST00000434310 759 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 AC099670.2-201ENST00000435130 321 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 RPL23AP33-201ENST00000442301 452 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 CYCSP51-201ENST00000443545 318 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC5.37□□□□□ -1.55
CPNE3O75131 AL450023.1-201ENST00000450868 751 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 MIR2053-201ENST00000459295 91 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 RN7SL51P-201ENST00000468230 285 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 RN7SL547P-201ENST00000490793 290 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 AP001086.1-201ENST00000494882 321 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.37□□□□□ -1.55
CPNE3O75131 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.37□□□□□ -1.55
CPNE3O75131 AC051619.2-201ENST00000559063 397 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 AC005224.3-201ENST00000584683 2140 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.37□□□□□ -1.55
CPNE3O75131 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.37□□□□□ -1.55
CPNE3O75131 AC006115.2-201ENST00000596823 202 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 AC012669.1-201ENST00000603209 283 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms