Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 AC244098.2-201ENST00000422068 99 ntBASIC3.55□□□□□ -1.84
BRD4O60885 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.55□□□□□ -1.84
BRD4O60885 CKS1BP5-201ENST00000434172 273 ntBASIC3.55□□□□□ -1.84
BRD4O60885 HMGB1P18-201ENST00000438801 619 ntBASIC3.55□□□□□ -1.84
BRD4O60885 BUD31P2-201ENST00000449374 300 ntBASIC3.55□□□□□ -1.84
BRD4O60885 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.55□□□□□ -1.84
BRD4O60885 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.55□□□□□ -1.84
BRD4O60885 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.55□□□□□ -1.84
BRD4O60885 RPS29P21-201ENST00000496272 170 ntBASIC3.55□□□□□ -1.84
BRD4O60885 Y_RNA.676-201ENST00000516393 96 ntBASIC3.55□□□□□ -1.84
BRD4O60885 AF279873.1-201ENST00000523393 313 ntBASIC3.55□□□□□ -1.84
BRD4O60885 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.55□□□□□ -1.84
BRD4O60885 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.55□□□□□ -1.84
BRD4O60885 AC007621.1-201ENST00000604544 437 ntBASIC3.55□□□□□ -1.84
BRD4O60885 AC011472.4-201ENST00000615848 491 ntBASIC3.55□□□□□ -1.84
BRD4O60885 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
BRD4O60885 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
BRD4O60885 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
BRD4O60885 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.54□□□□□ -1.84
BRD4O60885 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
BRD4O60885 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.54□□□□□ -1.84
BRD4O60885 RPS27P5-201ENST00000444247 244 ntBASIC3.54□□□□□ -1.84
BRD4O60885 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.54□□□□□ -1.84
BRD4O60885 AC104308.1-201ENST00000454621 333 ntBASIC3.54□□□□□ -1.84
BRD4O60885 RPS15AP1-201ENST00000457423 391 ntBASIC3.54□□□□□ -1.84
BRD4O60885 AC113398.2-201ENST00000507630 558 ntBASIC3.54□□□□□ -1.84
BRD4O60885 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.54□□□□□ -1.84
BRD4O60885 RN7SKP282-201ENST00000516824 299 ntBASIC3.54□□□□□ -1.84
BRD4O60885 SEC11B-201ENST00000518383 499 ntBASIC3.54□□□□□ -1.84
BRD4O60885 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.54□□□□□ -1.84
BRD4O60885 OR7K1P-201ENST00000546439 926 ntBASIC3.54□□□□□ -1.84
BRD4O60885 CKS1BP1-201ENST00000555221 240 ntBASIC3.54□□□□□ -1.84
BRD4O60885 SNRPGP15-201ENST00000600149 222 ntBASIC3.54□□□□□ -1.84
BRD4O60885 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.54□□□□□ -1.84
BRD4O60885 FAM133CP-201ENST00000332869 704 ntBASIC3.53□□□□□ -1.84
BRD4O60885 RNU6-482P-201ENST00000391068 107 ntBASIC3.53□□□□□ -1.84
BRD4O60885 RNU1-101P-201ENST00000391171 127 ntBASIC3.53□□□□□ -1.84
BRD4O60885 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
BRD4O60885 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.53□□□□□ -1.84
BRD4O60885 RPL5P13-201ENST00000462840 709 ntBASIC3.53□□□□□ -1.84
BRD4O60885 AC126182.1-201ENST00000478134 357 ntBASIC3.53□□□□□ -1.84
BRD4O60885 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.53□□□□□ -1.84
BRD4O60885 AC090071.1-201ENST00000507713 644 ntBASIC3.53□□□□□ -1.84
BRD4O60885 RNU1-61P-201ENST00000516107 151 ntBASIC3.53□□□□□ -1.84
BRD4O60885 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.53□□□□□ -1.84
BRD4O60885 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.53□□□□□ -1.84
BRD4O60885 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.53□□□□□ -1.84
BRD4O60885 BX664608.1-201ENST00000610519 487 ntBASIC3.53□□□□□ -1.84
BRD4O60885 MIR6864-201ENST00000617935 70 ntBASIC3.53□□□□□ -1.84
BRD4O60885 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
BRD4O60885 AC009501.3-201ENST00000605001 1352 ntBASIC3.53□□□□□ -1.85
BRD4O60885 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.52□□□□□ -1.85
BRD4O60885 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.52□□□□□ -1.85
BRD4O60885 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
BRD4O60885 RPL36AP6-201ENST00000435770 321 ntBASIC3.52□□□□□ -1.85
BRD4O60885 HMGB3P12-201ENST00000438745 556 ntBASIC3.52□□□□□ -1.85
BRD4O60885 MTCYBP12-201ENST00000440559 1134 ntBASIC3.52□□□□□ -1.85
BRD4O60885 AC011816.1-201ENST00000441346 546 ntBASIC3.52□□□□□ -1.85
BRD4O60885 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.52□□□□□ -1.85
BRD4O60885 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
BRD4O60885 HMGN2P13-201ENST00000476476 274 ntBASIC3.52□□□□□ -1.85
BRD4O60885 Y_RNA.673-201ENST00000516306 88 ntBASIC3.52□□□□□ -1.85
BRD4O60885 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.52□□□□□ -1.85
BRD4O60885 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.52□□□□□ -1.85
BRD4O60885 AC007536.1-201ENST00000533382 349 ntBASIC3.52□□□□□ -1.85
BRD4O60885 AC074029.1-201ENST00000552531 1044 ntBASIC3.52□□□□□ -1.85
BRD4O60885 AL391156.1-201ENST00000554965 554 ntBASIC3.52□□□□□ -1.85
BRD4O60885 MTND4LP24-201ENST00000572277 291 ntBASIC3.52□□□□□ -1.85
BRD4O60885 AC115085.1-201ENST00000588924 229 ntBASIC3.52□□□□□ -1.85
BRD4O60885 DNAJC19P3-201ENST00000594491 331 ntBASIC3.52□□□□□ -1.85
BRD4O60885 PCNAP1-202ENST00000595299 752 ntBASIC3.52□□□□□ -1.85
BRD4O60885 AL109653.1-201ENST00000603091 248 ntBASIC3.52□□□□□ -1.85
BRD4O60885 AC069304.3-201ENST00000603938 1084 ntBASIC3.52□□□□□ -1.85
BRD4O60885 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.52□□□□□ -1.85
BRD4O60885 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.52□□□□□ -1.85
BRD4O60885 AC103798.2-201ENST00000624292 632 ntBASIC3.52□□□□□ -1.85
BRD4O60885 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.52□□□□□ -1.85
BRD4O60885 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.52□□□□□ -1.85
BRD4O60885 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.52□□□□□ -1.85
BRD4O60885 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
BRD4O60885 BX276092.3-201ENST00000424182 230 ntBASIC3.51□□□□□ -1.85
BRD4O60885 RPL7P46-201ENST00000425129 740 ntBASIC3.51□□□□□ -1.85
BRD4O60885 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.51□□□□□ -1.85
BRD4O60885 AC093392.2-201ENST00000450682 337 ntBASIC3.51□□□□□ -1.85
BRD4O60885 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.51□□□□□ -1.85
BRD4O60885 OR6K1P-201ENST00000456766 971 ntBASIC3.51□□□□□ -1.85
BRD4O60885 MTCO3P35-201ENST00000485582 781 ntBASIC3.51□□□□□ -1.85
BRD4O60885 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
BRD4O60885 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.51□□□□□ -1.85
BRD4O60885 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.51□□□□□ -1.85
BRD4O60885 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.51□□□□□ -1.85
BRD4O60885 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.51□□□□□ -1.85
BRD4O60885 AC090312.2-201ENST00000582687 378 ntBASIC3.51□□□□□ -1.85
BRD4O60885 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.51□□□□□ -1.85
BRD4O60885 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.51□□□□□ -1.85
BRD4O60885 MTND5P7-201ENST00000413558 1798 ntBASIC3.51□□□□□ -1.85
BRD4O60885 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
BRD4O60885 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
BRD4O60885 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
BRD4O60885 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms