Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 MIR3118-1-201ENST00000581787 76 ntBASIC5.66□□□□□ -1.5
GRIN3BO60391 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.66□□□□□ -1.5
GRIN3BO60391 AP000942.4-201ENST00000604811 241 ntBASIC5.66□□□□□ -1.5
GRIN3BO60391 Z95327.3-201ENST00000610385 572 ntBASIC5.66□□□□□ -1.5
GRIN3BO60391 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GRIN3BO60391 AC123768.4-201ENST00000616244 701 ntBASIC5.66□□□□□ -1.5
GRIN3BO60391 AC012442.3-202ENST00000636742 206 ntBASIC5.66□□□□□ -1.5
GRIN3BO60391 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GRIN3BO60391 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.66□□□□□ -1.5
GRIN3BO60391 AC130650.2-201ENST00000618736 2403 ntBASIC5.66□□□□□ -1.5
GRIN3BO60391 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GRIN3BO60391 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.66□□□□□ -1.5
GRIN3BO60391 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GRIN3BO60391 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
GRIN3BO60391 AC092376.2-201ENST00000622621 4116 ntBASIC5.65□□□□□ -1.5
GRIN3BO60391 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
GRIN3BO60391 RNU6-1120P-201ENST00000362988 108 ntBASIC5.65□□□□□ -1.5
GRIN3BO60391 Y_RNA.86-201ENST00000363020 111 ntBASIC5.65□□□□□ -1.5
GRIN3BO60391 RNU4-73P-201ENST00000363164 141 ntBASIC5.65□□□□□ -1.5
GRIN3BO60391 RNU6-692P-201ENST00000384496 107 ntBASIC5.65□□□□□ -1.5
GRIN3BO60391 MRPL50P2-201ENST00000416821 482 ntBASIC5.65□□□□□ -1.5
GRIN3BO60391 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.65□□□□□ -1.5
GRIN3BO60391 RPS29P7-201ENST00000439662 171 ntBASIC5.65□□□□□ -1.5
GRIN3BO60391 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.65□□□□□ -1.5
GRIN3BO60391 AL049734.2-201ENST00000441066 616 ntBASIC5.65□□□□□ -1.5
GRIN3BO60391 RNU6-261P-201ENST00000459506 102 ntBASIC5.65□□□□□ -1.5
GRIN3BO60391 RPS20P20-201ENST00000460498 340 ntBASIC5.65□□□□□ -1.5
GRIN3BO60391 MTCO2P29-201ENST00000465212 189 ntBASIC5.65□□□□□ -1.5
GRIN3BO60391 AC010486.1-201ENST00000511793 424 ntBASIC5.65□□□□□ -1.5
GRIN3BO60391 AC104057.1-201ENST00000515547 497 ntBASIC5.65□□□□□ -1.5
GRIN3BO60391 RNU6-835P-201ENST00000516974 104 ntBASIC5.65□□□□□ -1.5
GRIN3BO60391 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.65□□□□□ -1.5
GRIN3BO60391 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.65□□□□□ -1.5
GRIN3BO60391 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.65□□□□□ -1.5
GRIN3BO60391 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.65□□□□□ -1.5
GRIN3BO60391 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.65□□□□□ -1.5
GRIN3BO60391 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.65□□□□□ -1.5
GRIN3BO60391 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.65□□□□□ -1.5
GRIN3BO60391 AC007424.1-203ENST00000554613 687 ntBASIC5.65□□□□□ -1.5
GRIN3BO60391 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.65□□□□□ -1.5
GRIN3BO60391 AC055876.1-202ENST00000567053 138 ntBASIC5.65□□□□□ -1.5
GRIN3BO60391 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.65□□□□□ -1.5
GRIN3BO60391 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.65□□□□□ -1.5
GRIN3BO60391 AL138721.1-201ENST00000616756 179 ntBASIC5.65□□□□□ -1.5
GRIN3BO60391 AC091953.2-201ENST00000623979 160 ntBASIC5.65□□□□□ -1.5
GRIN3BO60391 AC138649.5-201ENST00000637456 137 ntBASIC5.65□□□□□ -1.5
GRIN3BO60391 AC024614.3-201ENST00000637860 256 ntBASIC5.65□□□□□ -1.5
GRIN3BO60391 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
GRIN3BO60391 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
GRIN3BO60391 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
GRIN3BO60391 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
GRIN3BO60391 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
GRIN3BO60391 AC092125.1-201ENST00000562568 1995 ntBASIC5.65□□□□□ -1.51
GRIN3BO60391 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
GRIN3BO60391 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
GRIN3BO60391 MUC2-202ENST00000613187 4845 ntBASIC5.65□□□□□ -1.51
GRIN3BO60391 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
GRIN3BO60391 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.65□□□□□ -1.51
GRIN3BO60391 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.65□□□□□ -1.51
GRIN3BO60391 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.65□□□□□ -1.51
GRIN3BO60391 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.65□□□□□ -1.51
GRIN3BO60391 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
GRIN3BO60391 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.64□□□□□ -1.51
GRIN3BO60391 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GRIN3BO60391 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.64□□□□□ -1.51
GRIN3BO60391 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GRIN3BO60391 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GRIN3BO60391 AC011978.2-201ENST00000569835 2054 ntBASIC5.64□□□□□ -1.51
GRIN3BO60391 Y_RNA.142-201ENST00000363491 102 ntBASIC5.64□□□□□ -1.51
GRIN3BO60391 RNU6-108P-201ENST00000365558 107 ntBASIC5.64□□□□□ -1.51
GRIN3BO60391 RNU6-1293P-201ENST00000384077 107 ntBASIC5.64□□□□□ -1.51
GRIN3BO60391 COX5BP7-201ENST00000414780 274 ntBASIC5.64□□□□□ -1.51
GRIN3BO60391 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GRIN3BO60391 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.64□□□□□ -1.51
GRIN3BO60391 AC005297.2-201ENST00000450430 606 ntBASIC5.64□□□□□ -1.51
GRIN3BO60391 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.64□□□□□ -1.51
GRIN3BO60391 AC243772.1-201ENST00000451620 410 ntBASIC5.64□□□□□ -1.51
GRIN3BO60391 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.64□□□□□ -1.51
GRIN3BO60391 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.64□□□□□ -1.51
GRIN3BO60391 RPS4XP18-201ENST00000495480 763 ntBASIC5.64□□□□□ -1.51
GRIN3BO60391 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.64□□□□□ -1.51
GRIN3BO60391 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.64□□□□□ -1.51
GRIN3BO60391 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC5.64□□□□□ -1.51
GRIN3BO60391 AC010587.1-201ENST00000505809 469 ntBASIC5.64□□□□□ -1.51
GRIN3BO60391 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.64□□□□□ -1.51
GRIN3BO60391 FGF7P4-201ENST00000509595 295 ntBASIC5.64□□□□□ -1.51
GRIN3BO60391 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.64□□□□□ -1.51
GRIN3BO60391 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.64□□□□□ -1.51
GRIN3BO60391 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.64□□□□□ -1.51
GRIN3BO60391 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.64□□□□□ -1.51
GRIN3BO60391 AL352979.3-201ENST00000553515 247 ntBASIC5.64□□□□□ -1.51
GRIN3BO60391 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.64□□□□□ -1.51
GRIN3BO60391 AC015917.1-201ENST00000579654 510 ntBASIC5.64□□□□□ -1.51
GRIN3BO60391 AC005498.1-201ENST00000592125 465 ntBASIC5.64□□□□□ -1.51
GRIN3BO60391 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.64□□□□□ -1.51
GRIN3BO60391 AL136363.1-201ENST00000605349 337 ntBASIC5.64□□□□□ -1.51
GRIN3BO60391 AC096577.2-201ENST00000611455 153 ntBASIC5.64□□□□□ -1.51
GRIN3BO60391 RMST_3.1-201ENST00000611651 109 ntBASIC5.64□□□□□ -1.51
GRIN3BO60391 RNU6-156P-201ENST00000621869 107 ntBASIC5.64□□□□□ -1.51
GRIN3BO60391 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms