Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC010424.1-201ENST00000506336 297 ntBASIC4.72□□□□□ -1.65
PRPF3O43395 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.72□□□□□ -1.65
PRPF3O43395 Vault.1-201ENST00000516474 102 ntBASIC4.72□□□□□ -1.65
PRPF3O43395 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.72□□□□□ -1.65
PRPF3O43395 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.72□□□□□ -1.65
PRPF3O43395 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.72□□□□□ -1.65
PRPF3O43395 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PRPF3O43395 AL139395.1-201ENST00000603662 160 ntBASIC4.72□□□□□ -1.65
PRPF3O43395 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.72□□□□□ -1.65
PRPF3O43395 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.72□□□□□ -1.65
PRPF3O43395 HULC.1-201ENST00000612720 240 ntBASIC4.72□□□□□ -1.65
PRPF3O43395 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
PRPF3O43395 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.72□□□□□ -1.65
PRPF3O43395 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PRPF3O43395 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
PRPF3O43395 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
PRPF3O43395 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.72□□□□□ -1.65
PRPF3O43395 CCT4P2-201ENST00000233836 1548 ntBASIC4.72□□□□□ -1.65
PRPF3O43395 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
PRPF3O43395 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.65
PRPF3O43395 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.71□□□□□ -1.65
PRPF3O43395 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRPF3O43395 SNORA60-201ENST00000362396 134 ntBASIC4.71□□□□□ -1.66
PRPF3O43395 RNU6-1181P-201ENST00000384191 106 ntBASIC4.71□□□□□ -1.66
PRPF3O43395 SNORA70C-201ENST00000384538 135 ntBASIC4.71□□□□□ -1.66
PRPF3O43395 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PRPF3O43395 RNU6-712P-201ENST00000410558 100 ntBASIC4.71□□□□□ -1.66
PRPF3O43395 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.71□□□□□ -1.66
PRPF3O43395 AL356095.1-201ENST00000417217 199 ntBASIC4.71□□□□□ -1.66
PRPF3O43395 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.71□□□□□ -1.66
PRPF3O43395 RSL24D1P6-201ENST00000426934 401 ntBASIC4.71□□□□□ -1.66
PRPF3O43395 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PRPF3O43395 RPS4XP4-201ENST00000443195 763 ntBASIC4.71□□□□□ -1.66
PRPF3O43395 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.71□□□□□ -1.66
PRPF3O43395 AP000936.2-201ENST00000447151 681 ntBASIC4.71□□□□□ -1.66
PRPF3O43395 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.71□□□□□ -1.66
PRPF3O43395 EPS15P1-201ENST00000448836 336 ntBASIC4.71□□□□□ -1.66
PRPF3O43395 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.71□□□□□ -1.66
PRPF3O43395 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.71□□□□□ -1.66
PRPF3O43395 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.71□□□□□ -1.66
PRPF3O43395 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.71□□□□□ -1.66
PRPF3O43395 RPL29P14-201ENST00000495837 428 ntBASIC4.71□□□□□ -1.66
PRPF3O43395 AL139099.1-201ENST00000497398 403 ntBASIC4.71□□□□□ -1.66
PRPF3O43395 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.71□□□□□ -1.66
PRPF3O43395 RNU6-201P-201ENST00000517100 61 ntBASIC4.71□□□□□ -1.66
PRPF3O43395 IGKV2-38-201ENST00000517443 247 ntBASIC4.71□□□□□ -1.66
PRPF3O43395 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.71□□□□□ -1.66
PRPF3O43395 HMGN1P28-201ENST00000521340 364 ntBASIC4.71□□□□□ -1.66
PRPF3O43395 AC022878.1-201ENST00000530684 149 ntBASIC4.71□□□□□ -1.66
PRPF3O43395 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.71□□□□□ -1.66
PRPF3O43395 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.71□□□□□ -1.66
PRPF3O43395 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.71□□□□□ -1.66
PRPF3O43395 AC005771.1-201ENST00000585581 349 ntBASIC4.71□□□□□ -1.66
PRPF3O43395 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PRPF3O43395 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.71□□□□□ -1.66
PRPF3O43395 AC011468.4-201ENST00000603942 409 ntBASIC4.71□□□□□ -1.66
PRPF3O43395 AC104662.1-201ENST00000604448 511 ntBASIC4.71□□□□□ -1.66
PRPF3O43395 AL590099.1-201ENST00000615276 138 ntBASIC4.71□□□□□ -1.66
PRPF3O43395 AC009268.2-201ENST00000621925 457 ntBASIC4.71□□□□□ -1.66
PRPF3O43395 Z82217.1-201ENST00000625157 8149 ntBASIC4.71□□□□□ -1.66
PRPF3O43395 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PRPF3O43395 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.71□□□□□ -1.66
PRPF3O43395 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRPF3O43395 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF3O43395 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PRPF3O43395 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF3O43395 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.7□□□□□ -1.66
PRPF3O43395 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF3O43395 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF3O43395 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF3O43395 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.7□□□□□ -1.66
PRPF3O43395 RNA5SP130-201ENST00000364431 114 ntBASIC4.7□□□□□ -1.66
PRPF3O43395 SNORA7.2-201ENST00000364446 145 ntBASIC4.7□□□□□ -1.66
PRPF3O43395 RHOT1P2-201ENST00000366423 333 ntBASIC4.7□□□□□ -1.66
PRPF3O43395 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
PRPF3O43395 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PRPF3O43395 Y_RNA.553-201ENST00000384670 102 ntBASIC4.7□□□□□ -1.66
PRPF3O43395 RPS26P8-201ENST00000393490 348 ntBASIC4.7□□□□□ -1.66
PRPF3O43395 AL022722.2-201ENST00000402519 180 ntBASIC4.7□□□□□ -1.66
PRPF3O43395 HSPE1P12-201ENST00000412576 301 ntBASIC4.7□□□□□ -1.66
PRPF3O43395 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.7□□□□□ -1.66
PRPF3O43395 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF3O43395 AC092832.1-201ENST00000422934 400 ntBASIC4.7□□□□□ -1.66
PRPF3O43395 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.7□□□□□ -1.66
PRPF3O43395 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.7□□□□□ -1.66
PRPF3O43395 AL445669.1-201ENST00000426743 755 ntBASIC4.7□□□□□ -1.66
PRPF3O43395 AC091862.1-201ENST00000438016 1100 ntBASIC4.7□□□□□ -1.66
PRPF3O43395 PDSS1P2-201ENST00000449397 678 ntBASIC4.7□□□□□ -1.66
PRPF3O43395 USP9YP12-201ENST00000450481 570 ntBASIC4.7□□□□□ -1.66
PRPF3O43395 RPS20P32-201ENST00000456044 356 ntBASIC4.7□□□□□ -1.66
PRPF3O43395 snoU109.1-201ENST00000459339 135 ntBASIC4.7□□□□□ -1.66
PRPF3O43395 HMGB1P36-201ENST00000487709 576 ntBASIC4.7□□□□□ -1.66
PRPF3O43395 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.7□□□□□ -1.66
PRPF3O43395 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PRPF3O43395 MTND3P5-201ENST00000512798 333 ntBASIC4.7□□□□□ -1.66
PRPF3O43395 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.7□□□□□ -1.66
PRPF3O43395 Y_RNA.655-201ENST00000515919 96 ntBASIC4.7□□□□□ -1.66
PRPF3O43395 AC090281.1-201ENST00000523019 276 ntBASIC4.7□□□□□ -1.66
PRPF3O43395 AP004371.1-201ENST00000525240 214 ntBASIC4.7□□□□□ -1.66
PRPF3O43395 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms