Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 RPL23AP12-201ENST00000467573 473 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 AC010618.1-201ENST00000469924 477 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 RPL39P36-201ENST00000490784 156 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.33□□□□□ -1.56
SRGAP3O43295 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SRGAP3O43295 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SRGAP3O43295 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.33□□□□□ -1.56
SRGAP3O43295 RN7SKP122-201ENST00000515923 296 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.33□□□□□ -1.56
SRGAP3O43295 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.33□□□□□ -1.56
SRGAP3O43295 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.33□□□□□ -1.56
SRGAP3O43295 AC006064.5-201ENST00000541782 248 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 AC093027.1-201ENST00000546698 429 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 SUB1P2-201ENST00000556401 297 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 MIR5186-201ENST00000577504 120 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.33□□□□□ -1.56
SRGAP3O43295 AC020910.2-201ENST00000603635 610 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 AP001836.1-201ENST00000604675 523 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 AL050343.2-201ENST00000607338 280 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 AL445567.2-201ENST00000618935 498 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 USP12-203ENST00000620323 349 ntTSL 3 BASIC5.33□□□□□ -1.56
SRGAP3O43295 AC006504.8-201ENST00000621046 635 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.33□□□□□ -1.56
SRGAP3O43295 MIR3653-201ENST00000625572 110 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.33□□□□□ -1.56
SRGAP3O43295 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.33□□□□□ -1.56
SRGAP3O43295 OR52H1-202ENST00000641796 1061 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SRGAP3O43295 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SRGAP3O43295 VPS35P1-201ENST00000563400 1518 ntBASIC5.33□□□□□ -1.56
SRGAP3O43295 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.32□□□□□ -1.56
SRGAP3O43295 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.32□□□□□ -1.56
SRGAP3O43295 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SRGAP3O43295 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SRGAP3O43295 RNU6-251P-201ENST00000363235 104 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 RNU6-282P-201ENST00000365357 103 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
SRGAP3O43295 RNU6-767P-201ENST00000384132 107 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 AC104297.1-201ENST00000393779 870 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.32□□□□□ -1.56
SRGAP3O43295 AL354751.2-201ENST00000415471 210 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 SNRPEP10-201ENST00000420249 274 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.32□□□□□ -1.56
SRGAP3O43295 AL353193.1-201ENST00000421444 268 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.32□□□□□ -1.56
SRGAP3O43295 AL035410.1-201ENST00000427409 427 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 RPS24P8-201ENST00000431490 402 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 GTF2IP20-201ENST00000431663 360 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SRGAP3O43295 NDUFA5P4-201ENST00000436704 385 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.32□□□□□ -1.56
SRGAP3O43295 AC132479.1-201ENST00000449160 144 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.32□□□□□ -1.56
SRGAP3O43295 RPS15AP1-201ENST00000457423 391 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 UQCRHP4-201ENST00000471686 272 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 AC105137.1-201ENST00000484355 562 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 AC104164.2-201ENST00000496953 495 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 AL592156.1-201ENST00000508758 304 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.32□□□□□ -1.56
SRGAP3O43295 PARP4P3-201ENST00000510265 317 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 RNU6-202P-201ENST00000515998 96 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 RNU6-445P-201ENST00000516949 107 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.32□□□□□ -1.56
SRGAP3O43295 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC5.32□□□□□ -1.56
SRGAP3O43295 OR4A12P-201ENST00000530847 918 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 AP003072.1-201ENST00000531740 145 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.32□□□□□ -1.56
SRGAP3O43295 CYCSP29-201ENST00000533731 318 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.32□□□□□ -1.56
SRGAP3O43295 TVP23BP1-201ENST00000557500 617 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.32□□□□□ -1.56
SRGAP3O43295 AC034268.2-201ENST00000571784 482 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC5.32□□□□□ -1.56
SRGAP3O43295 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.32□□□□□ -1.56
SRGAP3O43295 IPO5P1-202ENST00000600039 287 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 Y_RNA.812-201ENST00000610788 101 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 Y_RNA.784-201ENST00000613803 101 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 Y_RNA.787-201ENST00000616522 101 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 AL122125.1-201ENST00000616999 600 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 Y_RNA.780-201ENST00000617336 101 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 Y_RNA.801-201ENST00000619005 101 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 CDRT1-208ENST00000630868 794 ntBASIC5.32□□□□□ -1.56
SRGAP3O43295 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.32□□□□□ -1.56
SRGAP3O43295 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SRGAP3O43295 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SRGAP3O43295 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SRGAP3O43295 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SRGAP3O43295 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SRGAP3O43295 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
SRGAP3O43295 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.31□□□□□ -1.56
SRGAP3O43295 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
SRGAP3O43295 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.31□□□□□ -1.56
SRGAP3O43295 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SRGAP3O43295 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SRGAP3O43295 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SRGAP3O43295 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SRGAP3O43295 RNU1-94P-201ENST00000362627 173 ntBASIC5.31□□□□□ -1.56
SRGAP3O43295 RNU4-79P-201ENST00000362764 141 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 163.9 ms