Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HMGN4O00479 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.98□□□□□ -2.09
HMGN4O00479 RNU6-56P-201ENST00000516986 93 ntBASIC1.98□□□□□ -2.09
HMGN4O00479 RNU4-60P-201ENST00000517239 135 ntBASIC1.98□□□□□ -2.09
HMGN4O00479 AC103783.1-201ENST00000520506 373 ntBASIC1.98□□□□□ -2.09
HMGN4O00479 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.98□□□□□ -2.09
HMGN4O00479 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.98□□□□□ -2.09
HMGN4O00479 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
HMGN4O00479 AC087276.1-201ENST00000529659 480 ntBASIC1.98□□□□□ -2.09
HMGN4O00479 PTP4A1P6-201ENST00000531034 478 ntBASIC1.98□□□□□ -2.09
HMGN4O00479 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC1.98□□□□□ -2.09
HMGN4O00479 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.98□□□□□ -2.09
HMGN4O00479 SNRPGP18-201ENST00000553000 214 ntBASIC1.98□□□□□ -2.09
HMGN4O00479 OR4U1P-201ENST00000554958 912 ntBASIC1.98□□□□□ -2.09
HMGN4O00479 AC106734.1-201ENST00000568646 663 ntBASIC1.98□□□□□ -2.09
HMGN4O00479 MIR4672-201ENST00000583126 81 ntBASIC1.98□□□□□ -2.09
HMGN4O00479 AC008687.2-201ENST00000597865 520 ntBASIC1.98□□□□□ -2.09
HMGN4O00479 AL109653.1-201ENST00000603091 248 ntBASIC1.98□□□□□ -2.09
HMGN4O00479 AC103881.1-201ENST00000603476 538 ntBASIC1.98□□□□□ -2.09
HMGN4O00479 AC011890.2-201ENST00000613393 294 ntBASIC1.98□□□□□ -2.09
HMGN4O00479 SNHG22-203ENST00000617833 660 ntBASIC1.98□□□□□ -2.09
HMGN4O00479 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HMGN4O00479 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC1.98□□□□□ -2.09
HMGN4O00479 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.98□□□□□ -2.09
HMGN4O00479 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.98□□□□□ -2.09
HMGN4O00479 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
HMGN4O00479 MTND5P3-201ENST00000438536 1800 ntBASIC1.97□□□□□ -2.09
HMGN4O00479 RNA5SP37-201ENST00000365420 130 ntBASIC1.97□□□□□ -2.09
HMGN4O00479 XGY1-201ENST00000381172 446 ntBASIC1.97□□□□□ -2.09
HMGN4O00479 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC1.97□□□□□ -2.09
HMGN4O00479 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.97□□□□□ -2.09
HMGN4O00479 CALM1P2-201ENST00000452941 448 ntBASIC1.97□□□□□ -2.09
HMGN4O00479 AC090255.1-201ENST00000495779 349 ntBASIC1.97□□□□□ -2.09
HMGN4O00479 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC1.97□□□□□ -2.09
HMGN4O00479 ARL4AP2-201ENST00000507378 601 ntBASIC1.97□□□□□ -2.09
HMGN4O00479 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC1.97□□□□□ -2.09
HMGN4O00479 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
HMGN4O00479 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.97□□□□□ -2.09
HMGN4O00479 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HMGN4O00479 AL049779.4-201ENST00000604500 156 ntBASIC1.97□□□□□ -2.09
HMGN4O00479 AL121917.1-203ENST00000605534 577 ntBASIC1.97□□□□□ -2.09
HMGN4O00479 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HMGN4O00479 AC034102.8-201ENST00000615146 484 ntBASIC1.97□□□□□ -2.09
HMGN4O00479 AC022079.2-201ENST00000619739 566 ntBASIC1.97□□□□□ -2.09
HMGN4O00479 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.97□□□□□ -2.09
HMGN4O00479 AC090617.7-201ENST00000623952 126 ntBASIC1.97□□□□□ -2.09
HMGN4O00479 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.97□□□□□ -2.09
HMGN4O00479 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMGN4O00479 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
HMGN4O00479 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
HMGN4O00479 RNF6P1-201ENST00000444889 1784 ntBASIC1.96□□□□□ -2.1
HMGN4O00479 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC1.96□□□□□ -2.1
HMGN4O00479 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMGN4O00479 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HMGN4O00479 RNU6-600P-201ENST00000362524 99 ntBASIC1.96□□□□□ -2.1
HMGN4O00479 RNU1-91P-201ENST00000364746 163 ntBASIC1.96□□□□□ -2.1
HMGN4O00479 RNU6-356P-201ENST00000384140 107 ntBASIC1.96□□□□□ -2.1
HMGN4O00479 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
HMGN4O00479 RNU1-101P-201ENST00000391171 127 ntBASIC1.96□□□□□ -2.1
HMGN4O00479 RPL19P1-201ENST00000411635 428 ntBASIC1.96□□□□□ -2.1
HMGN4O00479 AC109583.1-201ENST00000432156 268 ntBASIC1.96□□□□□ -2.1
HMGN4O00479 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.96□□□□□ -2.1
HMGN4O00479 AL157827.1-201ENST00000447622 132 ntBASIC1.96□□□□□ -2.1
HMGN4O00479 HMGN1P5-201ENST00000448591 263 ntBASIC1.96□□□□□ -2.1
HMGN4O00479 RPL23AP7-203ENST00000449021 469 ntBASIC1.96□□□□□ -2.1
HMGN4O00479 RPL7P52-201ENST00000449200 742 ntBASIC1.96□□□□□ -2.1
HMGN4O00479 OR51B8P-201ENST00000449892 769 ntBASIC1.96□□□□□ -2.1
HMGN4O00479 AL021397.1-201ENST00000451806 248 ntBASIC1.96□□□□□ -2.1
HMGN4O00479 NPM1P13-201ENST00000452663 865 ntBASIC1.96□□□□□ -2.1
HMGN4O00479 RNU6-717P-201ENST00000459076 104 ntBASIC1.96□□□□□ -2.1
HMGN4O00479 HMGN2P13-201ENST00000476476 274 ntBASIC1.96□□□□□ -2.1
HMGN4O00479 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.96□□□□□ -2.1
HMGN4O00479 CCNHP1-201ENST00000513311 678 ntBASIC1.96□□□□□ -2.1
HMGN4O00479 RNU1-103P-201ENST00000516502 125 ntBASIC1.96□□□□□ -2.1
HMGN4O00479 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HMGN4O00479 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.96□□□□□ -2.1
HMGN4O00479 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HMGN4O00479 MTCO3P22-201ENST00000603219 784 ntBASIC1.96□□□□□ -2.1
HMGN4O00479 AC019131.2-201ENST00000609071 870 ntBASIC1.96□□□□□ -2.1
HMGN4O00479 VIS1.1-201ENST00000610517 203 ntBASIC1.96□□□□□ -2.1
HMGN4O00479 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC1.96□□□□□ -2.1
HMGN4O00479 CU459211.1-201ENST00000635667 749 ntBASIC1.96□□□□□ -2.1
HMGN4O00479 AC046144.1-201ENST00000478559 1853 ntBASIC1.96□□□□□ -2.1
HMGN4O00479 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.96□□□□□ -2.1
HMGN4O00479 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMGN4O00479 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HMGN4O00479 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMGN4O00479 SNORA7.2-201ENST00000364446 145 ntBASIC1.95□□□□□ -2.1
HMGN4O00479 RNA5SP160-201ENST00000364866 120 ntBASIC1.95□□□□□ -2.1
HMGN4O00479 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
HMGN4O00479 ARF4P3-201ENST00000397387 509 ntBASIC1.95□□□□□ -2.1
HMGN4O00479 AL024474.1-201ENST00000404655 591 ntBASIC1.95□□□□□ -2.1
HMGN4O00479 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.95□□□□□ -2.1
HMGN4O00479 AC007064.1-201ENST00000412238 351 ntBASIC1.95□□□□□ -2.1
HMGN4O00479 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC1.95□□□□□ -2.1
HMGN4O00479 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.95□□□□□ -2.1
HMGN4O00479 MTCO3P30-201ENST00000426425 670 ntBASIC1.95□□□□□ -2.1
HMGN4O00479 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.95□□□□□ -2.1
HMGN4O00479 RPL21P112-201ENST00000434403 463 ntBASIC1.95□□□□□ -2.1
HMGN4O00479 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms