Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC015813.4-201ENST00000610469 179 ntBASIC4.46□□□□□ -1.7
FOXN3O00409 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
FOXN3O00409 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.46□□□□□ -1.7
FOXN3O00409 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.46□□□□□ -1.7
FOXN3O00409 CR381572.1-201ENST00000625098 102 ntBASIC4.46□□□□□ -1.7
FOXN3O00409 AL392088.2-201ENST00000637607 285 ntBASIC4.46□□□□□ -1.7
FOXN3O00409 OR5BE1P-202ENST00000641168 1176 ntBASIC4.46□□□□□ -1.7
FOXN3O00409 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXN3O00409 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXN3O00409 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.46□□□□□ -1.7
FOXN3O00409 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXN3O00409 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
FOXN3O00409 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
FOXN3O00409 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
FOXN3O00409 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
FOXN3O00409 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
FOXN3O00409 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
FOXN3O00409 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
FOXN3O00409 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
FOXN3O00409 RNU1-32P-201ENST00000363937 159 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 RNA5SP366-201ENST00000365454 123 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 RHOT1P2-201ENST00000366423 333 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
FOXN3O00409 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXN3O00409 Y_RNA.548-201ENST00000384656 105 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
FOXN3O00409 RNU11-4P-201ENST00000391149 133 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 AL359704.1-201ENST00000411586 781 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 AF274854.1-201ENST00000413236 615 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.45□□□□□ -1.7
FOXN3O00409 Z97055.1-201ENST00000419730 712 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 CHIAP3-201ENST00000423668 1133 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 FAR2P4-202ENST00000425399 584 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 MTND4LP10-201ENST00000435146 291 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 CDC27P1-201ENST00000445384 715 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 AC099563.1-201ENST00000456086 418 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.45□□□□□ -1.7
FOXN3O00409 snoU13.3-201ENST00000459441 104 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 AC021382.1-201ENST00000483523 359 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
FOXN3O00409 AC099522.1-202ENST00000514718 367 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.45□□□□□ -1.7
FOXN3O00409 FABP5P5-201ENST00000515537 406 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 RNA5SP154-201ENST00000516193 111 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 HIGD1AP5-201ENST00000529959 259 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 AC105233.3-201ENST00000531125 744 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.45□□□□□ -1.7
FOXN3O00409 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.45□□□□□ -1.7
FOXN3O00409 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.45□□□□□ -1.7
FOXN3O00409 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.45□□□□□ -1.7
FOXN3O00409 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.45□□□□□ -1.7
FOXN3O00409 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.45□□□□□ -1.7
FOXN3O00409 AC022655.2-201ENST00000577280 318 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 AC012669.1-201ENST00000603209 283 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 AC107304.1-201ENST00000604229 296 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 AC008250.2-201ENST00000615261 205 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
FOXN3O00409 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.45□□□□□ -1.7
FOXN3O00409 AC106871.1-201ENST00000568324 3102 ntBASIC4.45□□□□□ -1.7
FOXN3O00409 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXN3O00409 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
FOXN3O00409 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXN3O00409 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXN3O00409 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXN3O00409 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXN3O00409 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXN3O00409 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXN3O00409 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FOXN3O00409 SNORA40.3-201ENST00000390964 122 ntBASIC4.44□□□□□ -1.7
FOXN3O00409 CCNG1P1-201ENST00000406783 885 ntBASIC4.44□□□□□ -1.7
FOXN3O00409 RNU6-712P-201ENST00000410558 100 ntBASIC4.44□□□□□ -1.7
FOXN3O00409 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.44□□□□□ -1.7
FOXN3O00409 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.44□□□□□ -1.7
FOXN3O00409 MTCO3P30-201ENST00000426425 670 ntBASIC4.44□□□□□ -1.7
FOXN3O00409 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXN3O00409 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.44□□□□□ -1.7
FOXN3O00409 AC006011.1-201ENST00000442758 349 ntBASIC4.44□□□□□ -1.7
FOXN3O00409 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.44□□□□□ -1.7
FOXN3O00409 AC112653.1-201ENST00000443851 386 ntBASIC4.44□□□□□ -1.7
FOXN3O00409 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.44□□□□□ -1.7
FOXN3O00409 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.44□□□□□ -1.7
FOXN3O00409 SSXP1-201ENST00000453640 473 ntBASIC4.44□□□□□ -1.7
FOXN3O00409 RN7SL860P-201ENST00000473738 223 ntBASIC4.44□□□□□ -1.7
FOXN3O00409 AC091167.1-201ENST00000492017 396 ntBASIC4.44□□□□□ -1.7
FOXN3O00409 AC112204.1-201ENST00000502591 103 ntBASIC4.44□□□□□ -1.7
FOXN3O00409 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.44□□□□□ -1.7
FOXN3O00409 CBX3P3-201ENST00000508108 532 ntBASIC4.44□□□□□ -1.7
FOXN3O00409 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.44□□□□□ -1.7
FOXN3O00409 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.44□□□□□ -1.7
FOXN3O00409 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXN3O00409 ZNF519P3-201ENST00000557158 1032 ntBASIC4.44□□□□□ -1.7
FOXN3O00409 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXN3O00409 RPL23AP87-202ENST00000573039 466 ntBASIC4.44□□□□□ -1.7
FOXN3O00409 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXN3O00409 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.44□□□□□ -1.7
FOXN3O00409 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.44□□□□□ -1.7
FOXN3O00409 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.44□□□□□ -1.7
FOXN3O00409 BNIP3P8-201ENST00000597863 560 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms