Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC188H7C350 HMGB1P22-201ENST00000505315 124 ntBASIC3.65□□□□□ -1.83
CCDC188H7C350 SLC25A15P5-201ENST00000508033 253 ntBASIC3.65□□□□□ -1.83
CCDC188H7C350 KLHL2P1-201ENST00000508691 521 ntBASIC3.65□□□□□ -1.83
CCDC188H7C350 AC108064.1-201ENST00000513791 460 ntBASIC3.65□□□□□ -1.83
CCDC188H7C350 AC093853.1-201ENST00000515689 483 ntBASIC3.65□□□□□ -1.83
CCDC188H7C350 RNA5SP315-201ENST00000516340 116 ntBASIC3.65□□□□□ -1.83
CCDC188H7C350 RNA5SP312-201ENST00000517068 116 ntBASIC3.65□□□□□ -1.83
CCDC188H7C350 HSPA8P13-201ENST00000523715 472 ntBASIC3.65□□□□□ -1.83
CCDC188H7C350 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC188H7C350 MIR3690-201ENST00000580266 75 ntBASIC3.65□□□□□ -1.83
CCDC188H7C350 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC188H7C350 AP001330.4-201ENST00000604350 154 ntBASIC3.65□□□□□ -1.83
CCDC188H7C350 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC188H7C350 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC188H7C350 AL590240.3-201ENST00000621416 943 ntBASIC3.65□□□□□ -1.83
CCDC188H7C350 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC188H7C350 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC188H7C350 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC188H7C350 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
CCDC188H7C350 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC188H7C350 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC188H7C350 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CCDC188H7C350 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC188H7C350 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC188H7C350 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CCDC188H7C350 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC188H7C350 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC188H7C350 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC188H7C350 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC188H7C350 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC188H7C350 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC188H7C350 AL121657.1-201ENST00000327215 531 ntBASIC3.64□□□□□ -1.83
CCDC188H7C350 RNA5SP383-201ENST00000362934 120 ntBASIC3.64□□□□□ -1.83
CCDC188H7C350 RNU6-173P-201ENST00000364215 104 ntBASIC3.64□□□□□ -1.83
CCDC188H7C350 SNORD6-201ENST00000365444 73 ntBASIC3.64□□□□□ -1.83
CCDC188H7C350 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC188H7C350 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC188H7C350 AC099677.1-201ENST00000420575 175 ntBASIC3.64□□□□□ -1.83
CCDC188H7C350 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC188H7C350 MTCO2P5-201ENST00000422621 426 ntBASIC3.64□□□□□ -1.83
CCDC188H7C350 AC079780.1-201ENST00000428259 207 ntBASIC3.64□□□□□ -1.83
CCDC188H7C350 HMGB3P5-201ENST00000428894 612 ntBASIC3.64□□□□□ -1.83
CCDC188H7C350 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC188H7C350 RPL23AP22-201ENST00000437556 453 ntBASIC3.64□□□□□ -1.83
CCDC188H7C350 AL662791.1-201ENST00000441992 928 ntBASIC3.64□□□□□ -1.83
CCDC188H7C350 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC188H7C350 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC188H7C350 ARPC3P5-201ENST00000448802 534 ntBASIC3.64□□□□□ -1.83
CCDC188H7C350 AC125238.1-201ENST00000448842 249 ntBASIC3.64□□□□□ -1.83
CCDC188H7C350 AL445669.2-201ENST00000454425 421 ntBASIC3.64□□□□□ -1.83
CCDC188H7C350 Z82190.1-201ENST00000454534 490 ntBASIC3.64□□□□□ -1.83
CCDC188H7C350 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC188H7C350 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CCDC188H7C350 AL139099.1-201ENST00000497398 403 ntBASIC3.64□□□□□ -1.83
CCDC188H7C350 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC188H7C350 AC026402.1-201ENST00000513642 170 ntBASIC3.64□□□□□ -1.83
CCDC188H7C350 MTCO1P35-201ENST00000515270 228 ntBASIC3.64□□□□□ -1.83
CCDC188H7C350 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC188H7C350 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC188H7C350 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CCDC188H7C350 PDCL2P2-201ENST00000533651 189 ntBASIC3.64□□□□□ -1.83
CCDC188H7C350 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC188H7C350 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC188H7C350 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC188H7C350 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC188H7C350 MIR1254-2-201ENST00000579553 63 ntBASIC3.64□□□□□ -1.83
CCDC188H7C350 AP000484.1-201ENST00000620067 1252 ntBASIC3.64□□□□□ -1.83
CCDC188H7C350 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.64□□□□□ -1.83
CCDC188H7C350 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC188H7C350 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC188H7C350 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC188H7C350 ZNF876P-202ENST00000398732 1485 ntBASIC3.64□□□□□ -1.83
CCDC188H7C350 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC188H7C350 AC017071.1-201ENST00000564407 2204 ntBASIC3.64□□□□□ -1.83
CCDC188H7C350 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CCDC188H7C350 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC188H7C350 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC188H7C350 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC188H7C350 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC188H7C350 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC188H7C350 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CCDC188H7C350 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC188H7C350 AP000776.1-201ENST00000530032 1663 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.63□□□□□ -1.83
CCDC188H7C350 FAM133CP-201ENST00000332869 704 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CCDC188H7C350 RNU6-621P-201ENST00000364752 109 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 MIR30B-201ENST00000384850 88 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 SNORA57.1-201ENST00000391227 145 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC188H7C350 RNU2-47P-201ENST00000410649 186 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC188H7C350 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC188H7C350 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC188H7C350 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC188H7C350 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC188H7C350 CYCSP43-201ENST00000438233 310 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 ISCA1P2-201ENST00000438679 421 ntBASIC3.63□□□□□ -1.83
CCDC188H7C350 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms