Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.14□□□□□ -2.07
CNOT1A5YKK6 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.14□□□□□ -2.07
CNOT1A5YKK6 EIF2S2P4-201ENST00000461070 984 ntBASIC2.14□□□□□ -2.07
CNOT1A5YKK6 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.14□□□□□ -2.07
CNOT1A5YKK6 LTV1P1-201ENST00000510683 1237 ntBASIC2.14□□□□□ -2.07
CNOT1A5YKK6 RNA5SP220-201ENST00000516298 104 ntBASIC2.14□□□□□ -2.07
CNOT1A5YKK6 MTCYBP19-201ENST00000517463 1124 ntBASIC2.14□□□□□ -2.07
CNOT1A5YKK6 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.14□□□□□ -2.07
CNOT1A5YKK6 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.14□□□□□ -2.07
CNOT1A5YKK6 Z99129.2-201ENST00000619967 314 ntBASIC2.14□□□□□ -2.07
CNOT1A5YKK6 AC093831.2-201ENST00000624393 3427 ntBASIC2.13□□□□□ -2.07
CNOT1A5YKK6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.13□□□□□ -2.07
CNOT1A5YKK6 Y_RNA.205-201ENST00000364128 113 ntBASIC2.13□□□□□ -2.07
CNOT1A5YKK6 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CNOT1A5YKK6 SNORA40.18-201ENST00000391200 128 ntBASIC2.13□□□□□ -2.07
CNOT1A5YKK6 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC2.13□□□□□ -2.07
CNOT1A5YKK6 AC093392.2-201ENST00000450682 337 ntBASIC2.13□□□□□ -2.07
CNOT1A5YKK6 AC080013.2-201ENST00000460866 323 ntBASIC2.13□□□□□ -2.07
CNOT1A5YKK6 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.13□□□□□ -2.07
CNOT1A5YKK6 AC021733.2-201ENST00000518830 497 ntBASIC2.13□□□□□ -2.07
CNOT1A5YKK6 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.13□□□□□ -2.07
CNOT1A5YKK6 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.13□□□□□ -2.07
CNOT1A5YKK6 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.13□□□□□ -2.07
CNOT1A5YKK6 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
CNOT1A5YKK6 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.13□□□□□ -2.07
CNOT1A5YKK6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
CNOT1A5YKK6 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.13□□□□□ -2.07
CNOT1A5YKK6 RNU2-17P-201ENST00000410290 190 ntBASIC2.13□□□□□ -2.07
CNOT1A5YKK6 AC013410.1-201ENST00000436223 1232 ntBASIC2.13□□□□□ -2.07
CNOT1A5YKK6 AC092473.1-201ENST00000441098 221 ntBASIC2.13□□□□□ -2.07
CNOT1A5YKK6 AL590399.6-201ENST00000446396 307 ntBASIC2.13□□□□□ -2.07
CNOT1A5YKK6 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC2.13□□□□□ -2.07
CNOT1A5YKK6 TRMT112P2-201ENST00000512910 132 ntBASIC2.13□□□□□ -2.07
CNOT1A5YKK6 RNA5SP380-201ENST00000517190 98 ntBASIC2.13□□□□□ -2.07
CNOT1A5YKK6 AP000857.1-201ENST00000532151 543 ntBASIC2.13□□□□□ -2.07
CNOT1A5YKK6 AC123904.3-201ENST00000547218 814 ntBASIC2.13□□□□□ -2.07
CNOT1A5YKK6 MIR4452-201ENST00000583004 71 ntBASIC2.13□□□□□ -2.07
CNOT1A5YKK6 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.13□□□□□ -2.07
CNOT1A5YKK6 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CNOT1A5YKK6 AL355578.1-201ENST00000607405 1328 ntBASIC2.12□□□□□ -2.07
CNOT1A5YKK6 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.12□□□□□ -2.07
CNOT1A5YKK6 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CNOT1A5YKK6 AC107021.2-201ENST00000567714 2095 ntBASIC2.12□□□□□ -2.07
CNOT1A5YKK6 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.12□□□□□ -2.07
CNOT1A5YKK6 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.12□□□□□ -2.07
CNOT1A5YKK6 RNA5SP239-201ENST00000410218 129 ntBASIC2.12□□□□□ -2.07
CNOT1A5YKK6 AP000275.1-201ENST00000411943 390 ntBASIC2.12□□□□□ -2.07
CNOT1A5YKK6 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC2.12□□□□□ -2.07
CNOT1A5YKK6 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.12□□□□□ -2.07
CNOT1A5YKK6 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.12□□□□□ -2.07
CNOT1A5YKK6 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.12□□□□□ -2.07
CNOT1A5YKK6 MRPL50P4-201ENST00000446432 475 ntBASIC2.12□□□□□ -2.07
CNOT1A5YKK6 AC107015.1-201ENST00000466902 747 ntBASIC2.12□□□□□ -2.07
CNOT1A5YKK6 MLLT10P2-201ENST00000506434 249 ntBASIC2.12□□□□□ -2.07
CNOT1A5YKK6 CCNHP1-201ENST00000513311 678 ntBASIC2.12□□□□□ -2.07
CNOT1A5YKK6 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.12□□□□□ -2.07
CNOT1A5YKK6 AC055876.1-202ENST00000567053 138 ntBASIC2.12□□□□□ -2.07
CNOT1A5YKK6 MIR4644-201ENST00000579929 84 ntBASIC2.12□□□□□ -2.07
CNOT1A5YKK6 MIR4285-201ENST00000581001 85 ntBASIC2.12□□□□□ -2.07
CNOT1A5YKK6 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
CNOT1A5YKK6 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CNOT1A5YKK6 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CNOT1A5YKK6 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.12□□□□□ -2.07
CNOT1A5YKK6 RPS20P25-201ENST00000412447 352 ntBASIC2.12□□□□□ -2.07
CNOT1A5YKK6 AC092991.1-201ENST00000477176 376 ntBASIC2.12□□□□□ -2.07
CNOT1A5YKK6 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.12□□□□□ -2.07
CNOT1A5YKK6 OR5D17P-201ENST00000531492 978 ntBASIC2.12□□□□□ -2.07
CNOT1A5YKK6 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.12□□□□□ -2.07
CNOT1A5YKK6 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.12□□□□□ -2.07
CNOT1A5YKK6 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.12□□□□□ -2.07
CNOT1A5YKK6 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CNOT1A5YKK6 ERHP2-201ENST00000402323 299 ntBASIC2.11□□□□□ -2.07
CNOT1A5YKK6 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.11□□□□□ -2.07
CNOT1A5YKK6 RPL23AP58-201ENST00000440453 469 ntBASIC2.11□□□□□ -2.07
CNOT1A5YKK6 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC2.11□□□□□ -2.07
CNOT1A5YKK6 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.11□□□□□ -2.07
CNOT1A5YKK6 RMST_2.1-201ENST00000617263 136 ntBASIC2.11□□□□□ -2.07
CNOT1A5YKK6 YWHAEP7-203ENST00000622054 312 ntBASIC2.11□□□□□ -2.07
CNOT1A5YKK6 MTND5P23-201ENST00000430812 1655 ntBASIC2.11□□□□□ -2.07
CNOT1A5YKK6 AL592437.2-201ENST00000421655 2434 ntBASIC2.11□□□□□ -2.07
CNOT1A5YKK6 PNPT1P2-201ENST00000456768 2050 ntBASIC2.11□□□□□ -2.07
CNOT1A5YKK6 RPS15AP12-201ENST00000419498 388 ntBASIC2.1□□□□□ -2.07
CNOT1A5YKK6 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC2.1□□□□□ -2.07
CNOT1A5YKK6 COX6CP2-201ENST00000444980 225 ntBASIC2.1□□□□□ -2.07
CNOT1A5YKK6 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.1□□□□□ -2.07
CNOT1A5YKK6 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.1□□□□□ -2.07
CNOT1A5YKK6 AP005137.2-201ENST00000609238 400 ntBASIC2.1□□□□□ -2.07
CNOT1A5YKK6 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CNOT1A5YKK6 SNORA25.6-201ENST00000364121 118 ntBASIC2.1□□□□□ -2.07
CNOT1A5YKK6 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CNOT1A5YKK6 RPL7P54-201ENST00000438336 674 ntBASIC2.1□□□□□ -2.07
CNOT1A5YKK6 NDUFS5P3-201ENST00000450668 321 ntBASIC2.1□□□□□ -2.07
CNOT1A5YKK6 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.1□□□□□ -2.07
CNOT1A5YKK6 AC011492.1-201ENST00000600023 315 ntBASIC2.1□□□□□ -2.07
CNOT1A5YKK6 AC022960.2-201ENST00000616300 666 ntBASIC2.1□□□□□ -2.07
CNOT1A5YKK6 MIR6715B-201ENST00000637172 77 ntBASIC2.1□□□□□ -2.07
CNOT1A5YKK6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CNOT1A5YKK6 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CNOT1A5YKK6 AC093909.5-201ENST00000621839 1799 ntBASIC2.1□□□□□ -2.07
CNOT1A5YKK6 AC090229.1-201ENST00000590983 1609 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms