Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 RPL31P60-201ENST00000478450 367 ntBASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 RNU6-1219P-201ENST00000516143 112 ntBASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 PABPC1P8-201ENST00000452851 2086 ntBASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.96□□□□□ -1.14
CCDC61Q9Y6R9 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 AC245100.2-201ENST00000454544 1679 ntBASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 Y_RNA.435-201ENST00000384095 112 ntBASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 RNU6-933P-201ENST00000384424 107 ntBASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 TMEM167AP1-201ENST00000423409 219 ntBASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 AL450023.1-201ENST00000450868 751 ntBASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 NUTF2P7-201ENST00000453086 375 ntBASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 AC100832.1-201ENST00000471945 383 ntBASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 AC074255.1-201ENST00000511259 501 ntBASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 AC100870.1-201ENST00000522035 505 ntBASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 MIR5701-3-201ENST00000578890 82 ntBASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 MIR5701-1-201ENST00000585138 82 ntBASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 AL158827.2-201ENST00000602494 330 ntBASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 AL590099.1-201ENST00000615276 138 ntBASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 MIR5701-2-201ENST00000615634 82 ntBASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 AC241377.1-201ENST00000619797 406 ntBASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 MIR8080-201ENST00000622224 89 ntBASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 AP001784.1-201ENST00000624107 428 ntBASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 AL691447.3-201ENST00000635020 330 ntBASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
CCDC61Q9Y6R9 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 ZNF299P-201ENST00000406845 1804 ntBASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 RNU1-19P-201ENST00000363306 165 ntBASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 RNA5SP234-201ENST00000363916 119 ntBASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 RNU6-898P-201ENST00000365627 104 ntBASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 Y_RNA.590-201ENST00000410140 107 ntBASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 AC007568.1-201ENST00000422912 471 ntBASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 AL133173.1-201ENST00000423458 397 ntBASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 AL159987.2-201ENST00000432754 307 ntBASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 CREM-230ENST00000474931 626 ntTSL 2 BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 RN7SL583P-201ENST00000475692 287 ntBASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 AC093767.1-201ENST00000504523 156 ntBASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 RNU6-496P-201ENST00000516145 99 ntBASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 AC126615.2-201ENST00000553003 515 ntBASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 AL442163.3-201ENST00000554110 156 ntBASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 FAM60BP-201ENST00000578364 658 ntBASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 CPDP1-201ENST00000579660 283 ntBASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 AL589994.2-201ENST00000621124 579 ntBASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 U6.92-201ENST00000636464 89 ntBASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 SALL4P7-201ENST00000555779 3120 ntBASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
CCDC61Q9Y6R9 AL139805.2-201ENST00000455305 2433 ntBASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms