Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 AC026801.2-201ENST00000515352 425 ntBASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 AL133271.1-201ENST00000538229 291 ntBASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 AL512310.1-201ENST00000548639 172 ntBASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 AC126177.3-201ENST00000551839 688 ntBASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 AL133153.1-201ENST00000557756 303 ntBASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 AP001429.1-201ENST00000602568 530 ntBASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 AL606834.2-201ENST00000602954 668 ntBASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 AC012669.1-201ENST00000603209 283 ntBASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 AF250324.2-201ENST00000608299 610 ntBASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 AL391813.2-201ENST00000609113 322 ntBASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 MIR6853-201ENST00000619642 74 ntBASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 AC019206.1-201ENST00000621938 425 ntBASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 AC091905.1-201ENST00000624400 311 ntBASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 AC019226.1-201ENST00000625666 515 ntBASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 AC004925.1-201ENST00000624256 2706 ntBASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 AC105074.1-201ENST00000623380 3095 ntBASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA9Q9Y5G4 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.69
PCDHGA9Q9Y5G4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 ELF2P3-201ENST00000445099 1506 ntBASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 AC116667.1-201ENST00000604855 2072 ntBASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 OR1S2-201ENST00000302592 978 ntBASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 RNU6-108P-201ENST00000365558 107 ntBASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 SNORA70F-201ENST00000384142 135 ntBASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 SNORA70.10-201ENST00000384515 134 ntBASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 AL590002.1-201ENST00000406554 418 ntBASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 BTF3P7-201ENST00000407097 488 ntBASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 EI24P1-201ENST00000416584 867 ntBASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 AC092832.1-201ENST00000422934 400 ntBASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 OR4K11P-201ENST00000431829 904 ntBASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 AC016831.4-201ENST00000438302 307 ntBASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 AL031584.1-201ENST00000447169 754 ntBASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 AC140076.1-201ENST00000449897 361 ntBASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 AL356981.1-201ENST00000454879 684 ntBASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 AC022795.1-201ENST00000473808 480 ntBASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 AC135721.1-201ENST00000497954 479 ntBASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 SCARNA22-201ENST00000503991 125 ntBASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 AC010342.1-201ENST00000514047 877 ntBASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 DEFB108D-201ENST00000527787 222 ntBASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 RPL21P12-201ENST00000559810 515 ntBASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 NDUFB4P11-201ENST00000560510 395 ntBASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 AC007363.1-201ENST00000604736 620 ntBASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 AC017083.3-201ENST00000609955 700 ntBASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 LRRC77P-213ENST00000637727 880 ntBASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 AC063976.2-201ENST00000425667 3556 ntBASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA9Q9Y5G4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.51□□□□□ -1.69
PCDHGA9Q9Y5G4 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHGA9Q9Y5G4 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHGA9Q9Y5G4 Y_RNA.573-201ENST00000384763 105 ntBASIC4.51□□□□□ -1.69
PCDHGA9Q9Y5G4 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PCDHGA9Q9Y5G4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.51□□□□□ -1.69
PCDHGA9Q9Y5G4 MRPS10P2-201ENST00000431226 381 ntBASIC4.51□□□□□ -1.69
PCDHGA9Q9Y5G4 GPR143P-201ENST00000434155 205 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms