Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 AC009313.2-201ENST00000417893 1941 ntBASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 AC138907.8-201ENST00000623981 2256 ntBASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 Y_RNA.26-201ENST00000362539 101 ntBASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 Y_RNA.64-201ENST00000362845 102 ntBASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 Y_RNA.180-201ENST00000363867 113 ntBASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 U3.10-201ENST00000364459 214 ntBASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 Y_RNA.276-201ENST00000364732 109 ntBASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 SNORD82-201ENST00000365530 70 ntBASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 RN7SKP81-201ENST00000365603 331 ntBASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 MIR137-201ENST00000385223 102 ntBASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 AC005042.1-201ENST00000393397 800 ntBASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 RNA5SP178-201ENST00000410380 128 ntBASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 CR383656.1-201ENST00000484916 377 ntBASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 AC105758.1-201ENST00000506038 399 ntBASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 AC091516.1-201ENST00000549191 703 ntBASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 SUB1P3-201ENST00000564581 315 ntBASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 MIR4311-201ENST00000580794 100 ntBASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 MIR3910-1-201ENST00000580936 111 ntBASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 MIR4293-201ENST00000584305 78 ntBASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 AC025857.2-201ENST00000602711 238 ntBASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 AC008162.1-201ENST00000604718 254 ntBASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 AL670379.4-201ENST00000605279 254 ntBASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 AL034546.1-201ENST00000623740 3693 ntBASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 AC093775.1-201ENST00000624154 1868 ntBASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 ZNF72P-201ENST00000425869 1908 ntBASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDHGC4Q9Y5F7 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 AC144833.1-201ENST00000567953 4089 ntBASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 Y_RNA.478-201ENST00000384358 107 ntBASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 RNU6-393P-201ENST00000384475 107 ntBASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 MTCO3P19-201ENST00000415864 321 ntBASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 AL133173.1-201ENST00000423458 397 ntBASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 TMEM183AP1-205ENST00000432739 290 ntBASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 REG1CP-206ENST00000447469 496 ntBASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 AL353691.1-201ENST00000451332 387 ntBASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 RPL36AP13-201ENST00000457490 317 ntBASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 RN7SL174P-201ENST00000475578 289 ntBASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 HMGB1P21-201ENST00000502313 581 ntBASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 AC096745.1-201ENST00000509945 370 ntBASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 GAPDHP62-201ENST00000515313 990 ntBASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 RN7SKP92-201ENST00000517266 244 ntBASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 MRPS21P7-201ENST00000566937 238 ntBASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 FO393422.1-201ENST00000603908 708 ntBASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 CU639417.4-201ENST00000623928 207 ntBASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 MIR4272-201ENST00000635924 64 ntBASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 CDC27P2-201ENST00000425026 1922 ntBASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGC4Q9Y5F7 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms