Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 AC087369.1-201ENST00000520775 996 ntBASIC6.22□□□□□ -1.41
PCDHB3Q9Y5E6 AC007956.1-201ENST00000555623 542 ntBASIC6.22□□□□□ -1.41
PCDHB3Q9Y5E6 AC023968.1-201ENST00000560719 475 ntBASIC6.22□□□□□ -1.41
PCDHB3Q9Y5E6 MIR5696-201ENST00000578474 85 ntBASIC6.22□□□□□ -1.41
PCDHB3Q9Y5E6 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDHB3Q9Y5E6 AC108706.1-201ENST00000611053 297 ntBASIC6.22□□□□□ -1.41
PCDHB3Q9Y5E6 AL031601.2-202ENST00000622650 282 ntBASIC6.22□□□□□ -1.41
PCDHB3Q9Y5E6 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDHB3Q9Y5E6 PWAR1-201ENST00000624188 2414 ntBASIC6.22□□□□□ -1.41
PCDHB3Q9Y5E6 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB3Q9Y5E6 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB3Q9Y5E6 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
PCDHB3Q9Y5E6 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB3Q9Y5E6 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.22□□□□□ -1.41
PCDHB3Q9Y5E6 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDHB3Q9Y5E6 AC009951.1-201ENST00000623674 2614 ntBASIC6.22□□□□□ -1.41
PCDHB3Q9Y5E6 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
PCDHB3Q9Y5E6 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
PCDHB3Q9Y5E6 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PCDHB3Q9Y5E6 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.21□□□□□ -1.41
PCDHB3Q9Y5E6 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PCDHB3Q9Y5E6 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.41
PCDHB3Q9Y5E6 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
PCDHB3Q9Y5E6 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.21□□□□□ -1.41
PCDHB3Q9Y5E6 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
PCDHB3Q9Y5E6 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
PCDHB3Q9Y5E6 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PCDHB3Q9Y5E6 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
PCDHB3Q9Y5E6 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
PCDHB3Q9Y5E6 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 RNA5SP435-201ENST00000364044 108 ntBASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 RNU6-1035P-201ENST00000384477 107 ntBASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 RNU6-918P-201ENST00000391219 106 ntBASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 MTCYBP2-201ENST00000407745 171 ntBASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 RPL21P90-201ENST00000415692 466 ntBASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 AL162389.1-201ENST00000449233 177 ntBASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 AC007458.1-201ENST00000542812 373 ntBASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 AC027288.2-201ENST00000553028 243 ntBASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 OR1E3-201ENST00000575608 948 ntBASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 AC067852.3-201ENST00000589177 561 ntBASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 AC098826.3-201ENST00000603823 466 ntBASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 MIR6811-201ENST00000620409 58 ntBASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDHB3Q9Y5E6 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 RNA5SP391-201ENST00000363456 119 ntBASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 RN7SKP15-201ENST00000364742 309 ntBASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 Y_RNA.497-201ENST00000384447 98 ntBASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 MIR188-201ENST00000385034 86 ntBASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 RNU11-4P-201ENST00000391149 133 ntBASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 RNA5SP431-201ENST00000410312 120 ntBASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 RPL23AP36-201ENST00000413895 458 ntBASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 RPL21P50-201ENST00000417698 477 ntBASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 AC093655.2-201ENST00000425735 631 ntBASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 AC092573.2-201ENST00000434546 243 ntBASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 Z92846.1-201ENST00000456203 268 ntBASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 AC133134.1-201ENST00000466800 359 ntBASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 RNU6-27P-201ENST00000516146 107 ntBASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 AL133399.1-201ENST00000527476 298 ntBASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 AC005191.1-201ENST00000603950 358 ntBASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 Y_RNA.772-201ENST00000606692 102 ntBASIC6.2□□□□□ -1.42
PCDHB3Q9Y5E6 AC141002.1-201ENST00000607025 279 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms