Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.58□□□□□ -1.84
SMC3Q9UQE7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.58□□□□□ -1.84
SMC3Q9UQE7 RAD23BP2-201ENST00000416003 1207 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SMC3Q9UQE7 YPEL5P1-201ENST00000419731 367 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.58□□□□□ -1.84
SMC3Q9UQE7 AC233981.1-201ENST00000423224 461 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 HSFY1P1-201ENST00000423928 1178 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.58□□□□□ -1.84
SMC3Q9UQE7 MTATP6P4-201ENST00000427725 675 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 AC244505.4-201ENST00000434905 287 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 SSXP5-201ENST00000443473 287 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 AL096829.2-201ENST00000446582 742 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 Z75741.1-201ENST00000446793 314 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.58□□□□□ -1.84
SMC3Q9UQE7 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 CDC42P1-201ENST00000456658 548 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 HMGB1P25-201ENST00000468402 607 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 AC020898.1-201ENST00000474167 787 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SMC3Q9UQE7 GAPDHP39-201ENST00000481866 979 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 AC092902.1-201ENST00000486999 259 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 AC105914.1-201ENST00000511798 226 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 SAP18P1-201ENST00000512058 390 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.58□□□□□ -1.84
SMC3Q9UQE7 RN7SKP157-201ENST00000516174 282 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.58□□□□□ -1.84
SMC3Q9UQE7 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.58□□□□□ -1.84
SMC3Q9UQE7 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
SMC3Q9UQE7 AC034105.4-201ENST00000568304 277 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 MIR4789-201ENST00000577469 82 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.58□□□□□ -1.84
SMC3Q9UQE7 AC008962.1-201ENST00000605729 304 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.58□□□□□ -1.84
SMC3Q9UQE7 AC105227.2-201ENST00000615075 605 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 AC078880.5-201ENST00000617845 421 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 AC006249.1-201ENST00000621223 471 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 AC099506.2-201ENST00000623074 221 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 AL590396.4-201ENST00000636779 956 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
SMC3Q9UQE7 AL353743.1-202ENST00000431724 1695 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 ZNF807-201ENST00000328088 1707 ntBASIC3.58□□□□□ -1.84
SMC3Q9UQE7 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SMC3Q9UQE7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.58□□□□□ -1.84
SMC3Q9UQE7 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SMC3Q9UQE7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SMC3Q9UQE7 AC008264.2-201ENST00000610193 3731 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SMC3Q9UQE7 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SMC3Q9UQE7 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SMC3Q9UQE7 RNU6-989P-201ENST00000362756 107 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 SNORA14A-201ENST00000364773 135 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SMC3Q9UQE7 U6.112-201ENST00000384129 70 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 RNU6-761P-201ENST00000384148 107 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 SNORA7.4-201ENST00000384249 137 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 RNU6-921P-201ENST00000384361 107 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 RPL7P25-201ENST00000404151 721 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 MTCO1P12-201ENST00000414273 1543 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.57□□□□□ -1.84
SMC3Q9UQE7 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.57□□□□□ -1.84
SMC3Q9UQE7 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.57□□□□□ -1.84
SMC3Q9UQE7 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 AC016696.1-201ENST00000446949 318 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SMC3Q9UQE7 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 AL590639.1-201ENST00000456484 337 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 RPS4XP10-201ENST00000465034 731 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 AC109925.1-201ENST00000478069 331 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.57□□□□□ -1.84
SMC3Q9UQE7 AC118282.1-201ENST00000506408 765 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 AC119751.1-201ENST00000513357 765 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.57□□□□□ -1.84
SMC3Q9UQE7 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.57□□□□□ -1.84
SMC3Q9UQE7 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.57□□□□□ -1.84
SMC3Q9UQE7 AC007536.1-201ENST00000533382 349 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.57□□□□□ -1.84
SMC3Q9UQE7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.57□□□□□ -1.84
SMC3Q9UQE7 AC074051.3-201ENST00000570238 358 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 UBL5P2-201ENST00000583788 219 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.57□□□□□ -1.84
SMC3Q9UQE7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.57□□□□□ -1.84
SMC3Q9UQE7 AL355812.1-201ENST00000603215 216 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 AC009220.3-201ENST00000604318 586 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 AC090116.1-201ENST00000615679 446 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 AC002076.2-201ENST00000617362 122 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 AC068722.2-201ENST00000618734 544 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.57□□□□□ -1.84
SMC3Q9UQE7 AC018692.3-201ENST00000623929 123 ntBASIC3.57□□□□□ -1.84
SMC3Q9UQE7 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.57□□□□□ -1.84
SMC3Q9UQE7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
SMC3Q9UQE7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMC3Q9UQE7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
SMC3Q9UQE7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMC3Q9UQE7 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.56□□□□□ -1.84
SMC3Q9UQE7 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SMC3Q9UQE7 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMC3Q9UQE7 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.56□□□□□ -1.84
SMC3Q9UQE7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms