Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 YWHAEP1-201ENST00000453697 763 ntBASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 DEFB109F-201ENST00000491870 277 ntBASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 RN7SKP258-201ENST00000517151 304 ntBASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 OR4H12P-201ENST00000556269 907 ntBASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 AC073539.2-201ENST00000597113 165 ntBASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 RNA5SP440-201ENST00000612665 119 ntBASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
FOXD3Q9UJU5 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 THAP12P5-201ENST00000405864 2275 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 RNU6-263P-201ENST00000363811 107 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 Y_RNA.188-201ENST00000363952 111 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 RNA5SP242-201ENST00000364171 118 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 Y_RNA.496-201ENST00000384444 101 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 GLULP6-201ENST00000399502 913 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 AL139039.1-201ENST00000401900 692 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 RNU6-847P-201ENST00000411115 108 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 UBE2V1P4-201ENST00000425374 344 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 AL645568.3-201ENST00000433683 316 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 GSTA11P-201ENST00000452866 669 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 AC087884.1-201ENST00000469738 328 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 TRBV5-2-201ENST00000489095 273 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 RN7SL57P-201ENST00000493687 290 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 RNU6-699P-201ENST00000517081 110 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 SNORD116.3-201ENST00000517176 78 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 Y_RNA.721-201ENST00000517207 102 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 IGBP1P1-201ENST00000554337 1009 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 AC026951.1-201ENST00000559530 2459 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 AC012669.1-201ENST00000603209 283 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 RN7SL787P-201ENST00000613000 284 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 AL161423.1-201ENST00000613700 262 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 SDR42E1P2-201ENST00000614861 481 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 MIR6826-201ENST00000617808 98 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 AL691477.1-201ENST00000624398 162 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 AL732372.2-225ENST00000642124 456 ntBASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
FOXD3Q9UJU5 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
FOXD3Q9UJU5 AC005224.3-201ENST00000584683 2140 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms