Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC104997.1-201ENST00000519761 717 ntBASIC2.57□□□□□ -2
VPS29Q9UBQ0 ERHP1-201ENST00000523006 310 ntBASIC2.57□□□□□ -2
VPS29Q9UBQ0 OSBPL9P3-201ENST00000534523 595 ntBASIC2.57□□□□□ -2
VPS29Q9UBQ0 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.57□□□□□ -2
VPS29Q9UBQ0 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.57□□□□□ -2
VPS29Q9UBQ0 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.57□□□□□ -2
VPS29Q9UBQ0 BNIP3P33-201ENST00000598912 569 ntBASIC2.57□□□□□ -2
VPS29Q9UBQ0 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.57□□□□□ -2
VPS29Q9UBQ0 DUXAP4-201ENST00000603046 613 ntBASIC2.57□□□□□ -2
VPS29Q9UBQ0 AC113368.1-201ENST00000603736 382 ntBASIC2.57□□□□□ -2
VPS29Q9UBQ0 AC004696.1-201ENST00000614345 607 ntBASIC2.57□□□□□ -2
VPS29Q9UBQ0 AP003122.6-201ENST00000623831 495 ntBASIC2.57□□□□□ -2
VPS29Q9UBQ0 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.57□□□□□ -2
VPS29Q9UBQ0 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
VPS29Q9UBQ0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.57□□□□□ -2
VPS29Q9UBQ0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.57□□□□□ -2
VPS29Q9UBQ0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.57□□□□□ -2
VPS29Q9UBQ0 TAB3P1-202ENST00000452645 1634 ntBASIC2.57□□□□□ -2
VPS29Q9UBQ0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.56□□□□□ -2
VPS29Q9UBQ0 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.56□□□□□ -2
VPS29Q9UBQ0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
VPS29Q9UBQ0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.56□□□□□ -2
VPS29Q9UBQ0 AL512646.1-201ENST00000269395 1077 ntBASIC2.56□□□□□ -2
VPS29Q9UBQ0 RNU6-819P-201ENST00000364116 107 ntBASIC2.56□□□□□ -2
VPS29Q9UBQ0 RNU1-112P-201ENST00000364401 164 ntBASIC2.56□□□□□ -2
VPS29Q9UBQ0 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
VPS29Q9UBQ0 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.56□□□□□ -2
VPS29Q9UBQ0 RPS20P25-201ENST00000412447 352 ntBASIC2.56□□□□□ -2
VPS29Q9UBQ0 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.56□□□□□ -2
VPS29Q9UBQ0 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.56□□□□□ -2
VPS29Q9UBQ0 SSXP9-201ENST00000417503 292 ntBASIC2.56□□□□□ -2
VPS29Q9UBQ0 LINC01347-201ENST00000417964 355 ntBASIC2.56□□□□□ -2
VPS29Q9UBQ0 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.56□□□□□ -2
VPS29Q9UBQ0 HSFY1P1-201ENST00000423928 1178 ntBASIC2.56□□□□□ -2
VPS29Q9UBQ0 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.56□□□□□ -2
VPS29Q9UBQ0 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.56□□□□□ -2
VPS29Q9UBQ0 XKRYP6-201ENST00000440468 1116 ntBASIC2.56□□□□□ -2
VPS29Q9UBQ0 XKRYP3-201ENST00000442113 1116 ntBASIC2.56□□□□□ -2
VPS29Q9UBQ0 RPS24P13-201ENST00000442520 397 ntBASIC2.56□□□□□ -2
VPS29Q9UBQ0 AC097499.1-201ENST00000444277 208 ntBASIC2.56□□□□□ -2
VPS29Q9UBQ0 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.56□□□□□ -2
VPS29Q9UBQ0 RNF138P1-201ENST00000502765 546 ntBASIC2.56□□□□□ -2
VPS29Q9UBQ0 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.56□□□□□ -2
VPS29Q9UBQ0 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.56□□□□□ -2
VPS29Q9UBQ0 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.56□□□□□ -2
VPS29Q9UBQ0 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.56□□□□□ -2
VPS29Q9UBQ0 MIR4635-201ENST00000583759 79 ntBASIC2.56□□□□□ -2
VPS29Q9UBQ0 SUMO2P14-201ENST00000604488 293 ntBASIC2.56□□□□□ -2
VPS29Q9UBQ0 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.56□□□□□ -2
VPS29Q9UBQ0 AC095031.1-201ENST00000623685 672 ntBASIC2.56□□□□□ -2
VPS29Q9UBQ0 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.56□□□□□ -2
VPS29Q9UBQ0 ZNF734P-201ENST00000419494 1534 ntBASIC2.56□□□□□ -2
VPS29Q9UBQ0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.56□□□□□ -2
VPS29Q9UBQ0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.56□□□□□ -2
VPS29Q9UBQ0 RNU6-1027P-201ENST00000383998 107 ntBASIC2.55□□□□□ -2
VPS29Q9UBQ0 MIR142-201ENST00000384835 87 ntBASIC2.55□□□□□ -2
VPS29Q9UBQ0 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.55□□□□□ -2
VPS29Q9UBQ0 MIR1289-1-201ENST00000408836 144 ntBASIC2.55□□□□□ -2
VPS29Q9UBQ0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.55□□□□□ -2
VPS29Q9UBQ0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
VPS29Q9UBQ0 AL592148.1-201ENST00000413568 445 ntBASIC2.55□□□□□ -2
VPS29Q9UBQ0 OFD1P18Y-201ENST00000420889 959 ntBASIC2.55□□□□□ -2
VPS29Q9UBQ0 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.55□□□□□ -2
VPS29Q9UBQ0 SAR1AP4-201ENST00000429225 591 ntBASIC2.55□□□□□ -2
VPS29Q9UBQ0 RPS3AP12-201ENST00000443616 753 ntBASIC2.55□□□□□ -2
VPS29Q9UBQ0 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.55□□□□□ -2
VPS29Q9UBQ0 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.55□□□□□ -2
VPS29Q9UBQ0 RPS29P12-201ENST00000460178 152 ntBASIC2.55□□□□□ -2
VPS29Q9UBQ0 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.55□□□□□ -2
VPS29Q9UBQ0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.55□□□□□ -2
VPS29Q9UBQ0 AC026427.2-201ENST00000506228 536 ntBASIC2.55□□□□□ -2
VPS29Q9UBQ0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.55□□□□□ -2
VPS29Q9UBQ0 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.55□□□□□ -2
VPS29Q9UBQ0 RNA5SP367-201ENST00000516557 118 ntBASIC2.55□□□□□ -2
VPS29Q9UBQ0 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.55□□□□□ -2
VPS29Q9UBQ0 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.55□□□□□ -2
VPS29Q9UBQ0 DNAJC8P1-201ENST00000554535 372 ntBASIC2.55□□□□□ -2
VPS29Q9UBQ0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.55□□□□□ -2
VPS29Q9UBQ0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.55□□□□□ -2
VPS29Q9UBQ0 AC091057.2-201ENST00000602594 792 ntBASIC2.55□□□□□ -2
VPS29Q9UBQ0 AC009220.3-201ENST00000604318 586 ntBASIC2.55□□□□□ -2
VPS29Q9UBQ0 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.55□□□□□ -2
VPS29Q9UBQ0 AC107905.1-201ENST00000616204 426 ntBASIC2.55□□□□□ -2
VPS29Q9UBQ0 AC092650.2-201ENST00000619984 902 ntBASIC2.55□□□□□ -2
VPS29Q9UBQ0 AC006249.1-201ENST00000621223 471 ntBASIC2.55□□□□□ -2
VPS29Q9UBQ0 AC119674.1-220ENST00000641502 1048 ntBASIC2.55□□□□□ -2
VPS29Q9UBQ0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
VPS29Q9UBQ0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.54□□□□□ -2
VPS29Q9UBQ0 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
VPS29Q9UBQ0 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VPS29Q9UBQ0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.54□□□□□ -2
VPS29Q9UBQ0 RNU1-100P-201ENST00000365255 165 ntBASIC2.54□□□□□ -2
VPS29Q9UBQ0 MIR9-1-201ENST00000385198 89 ntBASIC2.54□□□□□ -2
VPS29Q9UBQ0 RPL19P1-201ENST00000411635 428 ntBASIC2.54□□□□□ -2
VPS29Q9UBQ0 AC008280.1-201ENST00000418851 412 ntBASIC2.54□□□□□ -2
VPS29Q9UBQ0 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.54□□□□□ -2
VPS29Q9UBQ0 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.54□□□□□ -2
VPS29Q9UBQ0 RPS26P56-201ENST00000444468 240 ntBASIC2.54□□□□□ -2
VPS29Q9UBQ0 RPL39P40-201ENST00000445481 146 ntBASIC2.54□□□□□ -2
VPS29Q9UBQ0 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms