Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 HMGN1P11-201ENST00000508668 303 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 AC104619.4-201ENST00000510773 249 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 RNA5SP309-201ENST00000516670 106 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 NARSP2-201ENST00000518524 679 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 IGKV2D-19-201ENST00000523346 262 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 AC135279.1-201ENST00000543493 504 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 OR7K1P-201ENST00000546439 926 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 CYCSP2-201ENST00000558168 301 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 NBR2-204ENST00000587322 63 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 AC020914.6-201ENST00000594327 272 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 AC110760.3-201ENST00000598794 467 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 SRGNP1-201ENST00000603392 451 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 BNIP3P11-201ENST00000603878 563 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 AL161756.2-201ENST00000604597 246 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 AC010738.1-201ENST00000604970 987 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 AC064807.4-201ENST00000607201 407 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 AC091931.1-201ENST00000623488 728 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 AC079228.1-201ENST00000624774 1049 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 MIR4496-201ENST00000635896 61 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 AC006504.1-201ENST00000562493 3666 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 UBE3AP2-201ENST00000429033 2259 ntBASIC4.28□□□□□ -1.72
HDAC6Q9UBN7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 GDI2P1-201ENST00000429312 1336 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 AC066616.2-201ENST00000559334 1481 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 RNU6-462P-201ENST00000362659 105 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 HMGN2P8-201ENST00000391458 268 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 CYCSP45-201ENST00000402289 315 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 AC083875.1-201ENST00000419509 405 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 AL159169.1-201ENST00000421119 127 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 ATP5HP2-201ENST00000433885 485 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 KCTD9P3-201ENST00000434597 1169 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 CYCSP43-201ENST00000438233 310 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 ISCA1P2-201ENST00000438679 421 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 UBE2D3P4-201ENST00000441973 436 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 MTND1P29-201ENST00000448112 647 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 ARPC3P5-201ENST00000448802 534 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 AC026410.2-201ENST00000460281 156 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 AC092754.2-201ENST00000463506 460 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 RPS15AP17-201ENST00000470598 390 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 AC087385.1-201ENST00000475062 312 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 RPL5P23-201ENST00000496040 868 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 MTCYBP17-201ENST00000503579 789 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 MTCYBP37-201ENST00000510642 1133 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 HSPA8P13-201ENST00000523715 472 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 MIR5187-201ENST00000583479 76 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 MIR3922-201ENST00000585192 84 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 AC007179.3-201ENST00000604976 235 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 AC008443.7-201ENST00000622195 246 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 PCMTD1P7-201ENST00000634506 357 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 AC099063.3-201ENST00000642066 185 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 ELL2P3-201ENST00000457883 1602 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 IPO8P1-201ENST00000455509 3109 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 MTND5P24-201ENST00000438892 1767 ntBASIC4.27□□□□□ -1.73
HDAC6Q9UBN7 AC130650.2-201ENST00000618736 2403 ntBASIC4.26□□□□□ -1.73
HDAC6Q9UBN7 OTUD4P1-201ENST00000237841 3067 ntBASIC4.26□□□□□ -1.73
HDAC6Q9UBN7 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
HDAC6Q9UBN7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.26□□□□□ -1.73
HDAC6Q9UBN7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HDAC6Q9UBN7 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HDAC6Q9UBN7 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HDAC6Q9UBN7 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HDAC6Q9UBN7 RNU6-500P-201ENST00000362349 107 ntBASIC4.26□□□□□ -1.73
HDAC6Q9UBN7 RNU1-18P-201ENST00000363062 164 ntBASIC4.26□□□□□ -1.73
HDAC6Q9UBN7 SNORD116-1-201ENST00000384335 95 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms