Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.12□□□□□ -1.75
LRFN1Q9P244 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.12□□□□□ -1.75
LRFN1Q9P244 AC024909.2-201ENST00000553035 286 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.12□□□□□ -1.75
LRFN1Q9P244 OR4T1P-201ENST00000554933 911 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.12□□□□□ -1.75
LRFN1Q9P244 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.12□□□□□ -1.75
LRFN1Q9P244 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.12□□□□□ -1.75
LRFN1Q9P244 RSL24D1P11-201ENST00000591045 491 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.12□□□□□ -1.75
LRFN1Q9P244 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
LRFN1Q9P244 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.12□□□□□ -1.75
LRFN1Q9P244 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
LRFN1Q9P244 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.12□□□□□ -1.75
LRFN1Q9P244 DHX9P1-201ENST00000436565 3076 ntBASIC4.12□□□□□ -1.75
LRFN1Q9P244 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.12□□□□□ -1.75
LRFN1Q9P244 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.12□□□□□ -1.75
LRFN1Q9P244 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.11□□□□□ -1.75
LRFN1Q9P244 LINC00622-201ENST00000562811 1570 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 NXPH1-205ENST00000602349 1953 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.11□□□□□ -1.75
LRFN1Q9P244 RNA5SP515-201ENST00000364570 118 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 Y_RNA.436-201ENST00000384097 102 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 MIR19A-201ENST00000384878 82 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 OR6C69P-201ENST00000394268 893 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.11□□□□□ -1.75
LRFN1Q9P244 AL136372.1-201ENST00000403060 228 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 AL592291.1-201ENST00000403830 352 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 RPS3AP24-201ENST00000407896 734 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 RN7SKP56-201ENST00000410513 331 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 HMGN1P14-201ENST00000412459 517 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 SNRPFP1-201ENST00000414761 252 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 USP9YP13-201ENST00000417797 480 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.11□□□□□ -1.75
LRFN1Q9P244 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.11□□□□□ -1.75
LRFN1Q9P244 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LRFN1Q9P244 BX890604.2-201ENST00000427883 474 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LRFN1Q9P244 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.11□□□□□ -1.75
LRFN1Q9P244 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.11□□□□□ -1.75
LRFN1Q9P244 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.11□□□□□ -1.75
LRFN1Q9P244 RPL35AP22-201ENST00000436855 335 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 FTH1P1-201ENST00000437933 532 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 RPL22P17-201ENST00000438729 315 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 AC122718.1-201ENST00000439448 744 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LRFN1Q9P244 AP000936.2-201ENST00000447151 681 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 TPT1P14-201ENST00000448018 505 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.11□□□□□ -1.75
LRFN1Q9P244 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LRFN1Q9P244 RN7SL98P-201ENST00000462271 300 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 FAM133DP-201ENST00000464802 691 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 RAP1BP2-201ENST00000478270 544 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 RN7SL817P-201ENST00000480777 288 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.11□□□□□ -1.75
LRFN1Q9P244 AC114967.1-201ENST00000504890 259 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 MLLT10P2-201ENST00000506434 249 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.11□□□□□ -1.75
LRFN1Q9P244 AC004062.1-201ENST00000509926 645 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 AC021146.3-201ENST00000511911 260 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.11□□□□□ -1.75
LRFN1Q9P244 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.11□□□□□ -1.75
LRFN1Q9P244 AC026801.2-201ENST00000515352 425 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 RN7SKP244-201ENST00000516513 307 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.11□□□□□ -1.75
LRFN1Q9P244 AP000907.2-201ENST00000530827 353 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 AC015912.2-201ENST00000571053 181 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 FAM60BP-201ENST00000578364 658 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 MIR3690-201ENST00000580266 75 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 AC119751.7-201ENST00000600494 245 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 AC068790.3-201ENST00000602988 553 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.11□□□□□ -1.75
LRFN1Q9P244 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.11□□□□□ -1.75
LRFN1Q9P244 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 AC114781.5-201ENST00000615297 108 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.11□□□□□ -1.75
LRFN1Q9P244 AC090582.1-201ENST00000636321 199 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 AC099654.13-201ENST00000639774 207 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.11□□□□□ -1.75
LRFN1Q9P244 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LRFN1Q9P244 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.11□□□□□ -1.75
LRFN1Q9P244 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
LRFN1Q9P244 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.11□□□□□ -1.75
LRFN1Q9P244 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LRFN1Q9P244 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LRFN1Q9P244 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
LRFN1Q9P244 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
LRFN1Q9P244 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LRFN1Q9P244 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.1□□□□□ -1.75
LRFN1Q9P244 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LRFN1Q9P244 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LRFN1Q9P244 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.1□□□□□ -1.75
LRFN1Q9P244 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LRFN1Q9P244 AC009812.4-201ENST00000569134 1805 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 OR5P1P-201ENST00000299512 925 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
LRFN1Q9P244 RNA5SP388-201ENST00000362584 119 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LRFN1Q9P244 MIR23A-201ENST00000385245 73 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms