Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 HLA-N-201ENST00000437516 135 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 RSU1P2-202ENST00000437884 485 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 MTND1P34-201ENST00000438556 671 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 AL357520.1-201ENST00000441557 453 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.53□□□□□ -1.68
COL20A1Q9P218 AL500522.2-201ENST00000448562 343 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 RPL7P52-201ENST00000449200 742 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 MTND1P27-201ENST00000451117 902 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 snoU13.8-201ENST00000458890 104 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 AC146507.1-201ENST00000468335 354 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.53□□□□□ -1.68
COL20A1Q9P218 AC007537.2-201ENST00000472093 511 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 AC006517.1-201ENST00000480485 328 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 AF131216.2-201ENST00000512316 564 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL20A1Q9P218 AC093677.1-201ENST00000514414 678 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.53□□□□□ -1.68
COL20A1Q9P218 AP002453.2-201ENST00000533503 320 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 AC024224.1-201ENST00000538284 609 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.53□□□□□ -1.68
COL20A1Q9P218 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.53□□□□□ -1.68
COL20A1Q9P218 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.53□□□□□ -1.68
COL20A1Q9P218 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.53□□□□□ -1.68
COL20A1Q9P218 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.53□□□□□ -1.68
COL20A1Q9P218 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
COL20A1Q9P218 AC022968.1-201ENST00000567372 442 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 AGGF1P4-201ENST00000568249 801 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.53□□□□□ -1.68
COL20A1Q9P218 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.53□□□□□ -1.68
COL20A1Q9P218 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.53□□□□□ -1.68
COL20A1Q9P218 MIR548AB-201ENST00000584917 84 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 AC010680.4-201ENST00000605334 543 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 AC108479.2-201ENST00000617314 601 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 AL596245.1-201ENST00000618994 362 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 MIR7154-201ENST00000620673 73 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL20A1Q9P218 AC092447.10-201ENST00000620607 1652 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
COL20A1Q9P218 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.53□□□□□ -1.68
COL20A1Q9P218 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL20A1Q9P218 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.53□□□□□ -1.68
COL20A1Q9P218 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
COL20A1Q9P218 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.52□□□□□ -1.69
COL20A1Q9P218 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL20A1Q9P218 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL20A1Q9P218 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
COL20A1Q9P218 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL20A1Q9P218 RNU6-1119P-201ENST00000384349 108 ntBASIC4.52□□□□□ -1.69
COL20A1Q9P218 MIR30B-201ENST00000384850 88 ntBASIC4.52□□□□□ -1.69
COL20A1Q9P218 Y_RNA.598-201ENST00000410480 95 ntBASIC4.52□□□□□ -1.69
COL20A1Q9P218 RNU2-16P-201ENST00000410712 136 ntBASIC4.52□□□□□ -1.69
COL20A1Q9P218 AL513174.1-201ENST00000423182 629 ntBASIC4.52□□□□□ -1.69
COL20A1Q9P218 AC007742.1-201ENST00000425789 329 ntBASIC4.52□□□□□ -1.69
COL20A1Q9P218 ELOCP26-201ENST00000436067 329 ntBASIC4.52□□□□□ -1.69
COL20A1Q9P218 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.52□□□□□ -1.69
COL20A1Q9P218 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.52□□□□□ -1.69
COL20A1Q9P218 AP000542.1-201ENST00000448473 371 ntBASIC4.52□□□□□ -1.69
COL20A1Q9P218 USP9YP12-201ENST00000450481 570 ntBASIC4.52□□□□□ -1.69
COL20A1Q9P218 FABP3P2-201ENST00000453169 399 ntBASIC4.52□□□□□ -1.69
COL20A1Q9P218 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.52□□□□□ -1.69
COL20A1Q9P218 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.52□□□□□ -1.69
COL20A1Q9P218 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL20A1Q9P218 RN7SKP116-201ENST00000516902 319 ntBASIC4.52□□□□□ -1.69
COL20A1Q9P218 SCARNA14-201ENST00000516903 136 ntBASIC4.52□□□□□ -1.69
COL20A1Q9P218 IGKV2D-36-201ENST00000518643 226 ntBASIC4.52□□□□□ -1.69
COL20A1Q9P218 AC087369.1-201ENST00000520775 996 ntBASIC4.52□□□□□ -1.69
COL20A1Q9P218 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.52□□□□□ -1.69
COL20A1Q9P218 AC022882.1-201ENST00000532142 501 ntBASIC4.52□□□□□ -1.69
COL20A1Q9P218 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.52□□□□□ -1.69
COL20A1Q9P218 AC074050.1-201ENST00000563247 211 ntBASIC4.52□□□□□ -1.69
COL20A1Q9P218 AC005255.1-201ENST00000593748 216 ntBASIC4.52□□□□□ -1.69
COL20A1Q9P218 LLPHP1-201ENST00000603571 367 ntBASIC4.52□□□□□ -1.69
COL20A1Q9P218 AL121772.2-201ENST00000614331 297 ntBASIC4.52□□□□□ -1.69
COL20A1Q9P218 U73479.1-201ENST00000618062 168 ntBASIC4.52□□□□□ -1.69
COL20A1Q9P218 AC034229.5-201ENST00000624258 185 ntBASIC4.52□□□□□ -1.69
COL20A1Q9P218 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.52□□□□□ -1.69
COL20A1Q9P218 AC012442.3-202ENST00000636742 206 ntBASIC4.52□□□□□ -1.69
COL20A1Q9P218 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.52□□□□□ -1.69
COL20A1Q9P218 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
COL20A1Q9P218 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
COL20A1Q9P218 Z73965.1-201ENST00000623412 2297 ntBASIC4.52□□□□□ -1.69
COL20A1Q9P218 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.51□□□□□ -1.69
COL20A1Q9P218 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
COL20A1Q9P218 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
COL20A1Q9P218 RNU6-343P-201ENST00000364709 104 ntBASIC4.51□□□□□ -1.69
COL20A1Q9P218 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.51□□□□□ -1.69
COL20A1Q9P218 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
COL20A1Q9P218 RNU6-1042P-201ENST00000384204 107 ntBASIC4.51□□□□□ -1.69
COL20A1Q9P218 U8.11-201ENST00000384699 133 ntBASIC4.51□□□□□ -1.69
COL20A1Q9P218 U8.12-201ENST00000384701 133 ntBASIC4.51□□□□□ -1.69
COL20A1Q9P218 AL356421.1-201ENST00000403255 413 ntBASIC4.51□□□□□ -1.69
COL20A1Q9P218 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.51□□□□□ -1.69
COL20A1Q9P218 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL20A1Q9P218 ELOCP18-201ENST00000434209 337 ntBASIC4.51□□□□□ -1.69
COL20A1Q9P218 RPL23AP33-201ENST00000442301 452 ntBASIC4.51□□□□□ -1.69
COL20A1Q9P218 RPL7P36-201ENST00000444633 681 ntBASIC4.51□□□□□ -1.69
COL20A1Q9P218 GDI2P2-201ENST00000445131 608 ntBASIC4.51□□□□□ -1.69
COL20A1Q9P218 AL590399.6-201ENST00000446396 307 ntBASIC4.51□□□□□ -1.69
COL20A1Q9P218 AC073587.1-201ENST00000447093 876 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms