Protein–RNA interactions for Protein: Q9NZN3

EHD3, EH domain-containing protein 3, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EHD3Q9NZN3 TIMM9P3-201ENST00000428659 274 ntBASIC4.3□□□□□ -1.72
EHD3Q9NZN3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.3□□□□□ -1.72
EHD3Q9NZN3 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.3□□□□□ -1.72
EHD3Q9NZN3 SNRPEP8-201ENST00000442866 260 ntBASIC4.3□□□□□ -1.72
EHD3Q9NZN3 HSPE1P28-201ENST00000443139 211 ntBASIC4.3□□□□□ -1.72
EHD3Q9NZN3 DPPA3P1-201ENST00000448050 469 ntBASIC4.3□□□□□ -1.72
EHD3Q9NZN3 AC239809.1-201ENST00000450470 217 ntBASIC4.3□□□□□ -1.72
EHD3Q9NZN3 CEACAMP6-201ENST00000452007 574 ntBASIC4.3□□□□□ -1.72
EHD3Q9NZN3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.3□□□□□ -1.72
EHD3Q9NZN3 RPL23AP2-201ENST00000471227 466 ntBASIC4.3□□□□□ -1.72
EHD3Q9NZN3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.3□□□□□ -1.72
EHD3Q9NZN3 AP000926.1-201ENST00000479573 241 ntBASIC4.3□□□□□ -1.72
EHD3Q9NZN3 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.3□□□□□ -1.72
EHD3Q9NZN3 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.3□□□□□ -1.72
EHD3Q9NZN3 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.3□□□□□ -1.72
EHD3Q9NZN3 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.3□□□□□ -1.72
EHD3Q9NZN3 OR51K1P-201ENST00000510214 950 ntBASIC4.3□□□□□ -1.72
EHD3Q9NZN3 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.3□□□□□ -1.72
EHD3Q9NZN3 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.3□□□□□ -1.72
EHD3Q9NZN3 Y_RNA.672-201ENST00000516289 104 ntBASIC4.3□□□□□ -1.72
EHD3Q9NZN3 RNU6-714P-201ENST00000516963 103 ntBASIC4.3□□□□□ -1.72
EHD3Q9NZN3 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.3□□□□□ -1.72
EHD3Q9NZN3 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.3□□□□□ -1.72
EHD3Q9NZN3 HMGB1P33-201ENST00000563485 527 ntBASIC4.3□□□□□ -1.72
EHD3Q9NZN3 AC034268.2-201ENST00000571784 482 ntBASIC4.3□□□□□ -1.72
EHD3Q9NZN3 MIR4512-201ENST00000583257 77 ntBASIC4.3□□□□□ -1.72
EHD3Q9NZN3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.3□□□□□ -1.72
EHD3Q9NZN3 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.3□□□□□ -1.72
EHD3Q9NZN3 BNIP3P33-201ENST00000598912 569 ntBASIC4.3□□□□□ -1.72
EHD3Q9NZN3 AC025946.2-201ENST00000603398 234 ntBASIC4.3□□□□□ -1.72
EHD3Q9NZN3 AL390208.1-201ENST00000605885 644 ntBASIC4.3□□□□□ -1.72
EHD3Q9NZN3 AC011816.2-201ENST00000607089 556 ntBASIC4.3□□□□□ -1.72
EHD3Q9NZN3 RNU6-87P-201ENST00000607561 108 ntBASIC4.3□□□□□ -1.72
EHD3Q9NZN3 AC002553.4-201ENST00000616896 331 ntBASIC4.3□□□□□ -1.72
EHD3Q9NZN3 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.3□□□□□ -1.72
EHD3Q9NZN3 AC022140.2-201ENST00000623500 188 ntBASIC4.3□□□□□ -1.72
EHD3Q9NZN3 AC091905.1-201ENST00000624400 311 ntBASIC4.3□□□□□ -1.72
EHD3Q9NZN3 CYP3A51P-201ENST00000633513 256 ntBASIC4.3□□□□□ -1.72
EHD3Q9NZN3 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.3□□□□□ -1.72
EHD3Q9NZN3 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.3□□□□□ -1.72
EHD3Q9NZN3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
EHD3Q9NZN3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.3□□□□□ -1.72
EHD3Q9NZN3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
EHD3Q9NZN3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
EHD3Q9NZN3 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
EHD3Q9NZN3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
EHD3Q9NZN3 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.3□□□□□ -1.72
EHD3Q9NZN3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.3□□□□□ -1.72
EHD3Q9NZN3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
EHD3Q9NZN3 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
EHD3Q9NZN3 CPHL1P-201ENST00000461341 3407 ntBASIC4.3□□□□□ -1.72
EHD3Q9NZN3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 AC021146.4-201ENST00000309229 279 ntBASIC4.29□□□□□ -1.72
EHD3Q9NZN3 XIAPP3-201ENST00000312918 795 ntBASIC4.29□□□□□ -1.72
EHD3Q9NZN3 RNU6-1243P-201ENST00000364028 107 ntBASIC4.29□□□□□ -1.72
EHD3Q9NZN3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.29□□□□□ -1.72
EHD3Q9NZN3 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 AC105402.2-201ENST00000438503 358 ntBASIC4.29□□□□□ -1.72
EHD3Q9NZN3 AC112653.1-201ENST00000443851 386 ntBASIC4.29□□□□□ -1.72
EHD3Q9NZN3 AC073264.2-201ENST00000448886 166 ntBASIC4.29□□□□□ -1.72
EHD3Q9NZN3 AL162591.2-201ENST00000449634 317 ntBASIC4.29□□□□□ -1.72
EHD3Q9NZN3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.29□□□□□ -1.72
EHD3Q9NZN3 PLGLA-201ENST00000465668 449 ntBASIC4.29□□□□□ -1.72
EHD3Q9NZN3 PABPC1P3-201ENST00000469174 459 ntBASIC4.29□□□□□ -1.72
EHD3Q9NZN3 AC104563.1-201ENST00000476147 376 ntBASIC4.29□□□□□ -1.72
EHD3Q9NZN3 RPL23AP72-201ENST00000492447 435 ntBASIC4.29□□□□□ -1.72
EHD3Q9NZN3 AC020593.1-201ENST00000507399 299 ntBASIC4.29□□□□□ -1.72
EHD3Q9NZN3 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 AC022616.6-201ENST00000520479 119 ntBASIC4.29□□□□□ -1.72
EHD3Q9NZN3 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 AC107954.1-201ENST00000565906 727 ntBASIC4.29□□□□□ -1.72
EHD3Q9NZN3 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 NRBF2P1-201ENST00000587407 859 ntBASIC4.29□□□□□ -1.72
EHD3Q9NZN3 AC055876.5-201ENST00000605667 259 ntBASIC4.29□□□□□ -1.72
EHD3Q9NZN3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 AC025253.1-201ENST00000613623 543 ntBASIC4.29□□□□□ -1.72
EHD3Q9NZN3 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.29□□□□□ -1.72
EHD3Q9NZN3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms