Protein–RNA interactions for Protein: Q9NZC3

GDE1, Glycerophosphodiester phosphodiesterase 1, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1Q9NZC3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
GDE1Q9NZC3 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
GDE1Q9NZC3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
GDE1Q9NZC3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.81□□□□□ -1.8
GDE1Q9NZC3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
GDE1Q9NZC3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
GDE1Q9NZC3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
GDE1Q9NZC3 RPL23AP29-201ENST00000397284 453 ntBASIC3.81□□□□□ -1.8
GDE1Q9NZC3 AL031679.1-201ENST00000400616 525 ntBASIC3.81□□□□□ -1.8
GDE1Q9NZC3 MTCO3P12-201ENST00000416718 547 ntBASIC3.81□□□□□ -1.8
GDE1Q9NZC3 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.81□□□□□ -1.8
GDE1Q9NZC3 MTCO2P5-201ENST00000422621 426 ntBASIC3.81□□□□□ -1.8
GDE1Q9NZC3 TPTE2P3-201ENST00000441562 1189 ntBASIC3.81□□□□□ -1.8
GDE1Q9NZC3 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.81□□□□□ -1.8
GDE1Q9NZC3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.81□□□□□ -1.8
GDE1Q9NZC3 NPM1P49-201ENST00000448027 714 ntBASIC3.81□□□□□ -1.8
GDE1Q9NZC3 ARPC3P5-201ENST00000448802 534 ntBASIC3.81□□□□□ -1.8
GDE1Q9NZC3 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.81□□□□□ -1.8
GDE1Q9NZC3 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
GDE1Q9NZC3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
GDE1Q9NZC3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
GDE1Q9NZC3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.81□□□□□ -1.8
GDE1Q9NZC3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.81□□□□□ -1.8
GDE1Q9NZC3 RNU2-58P-201ENST00000516403 183 ntBASIC3.81□□□□□ -1.8
GDE1Q9NZC3 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.81□□□□□ -1.8
GDE1Q9NZC3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.81□□□□□ -1.8
GDE1Q9NZC3 DEFB131D-201ENST00000526803 184 ntBASIC3.81□□□□□ -1.8
GDE1Q9NZC3 MTCYBP41-201ENST00000528913 1123 ntBASIC3.81□□□□□ -1.8
GDE1Q9NZC3 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.81□□□□□ -1.8
GDE1Q9NZC3 AC007458.1-201ENST00000542812 373 ntBASIC3.81□□□□□ -1.8
GDE1Q9NZC3 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.81□□□□□ -1.8
GDE1Q9NZC3 AL121766.1-201ENST00000547436 487 ntBASIC3.81□□□□□ -1.8
GDE1Q9NZC3 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.81□□□□□ -1.8
GDE1Q9NZC3 NCAPGP2-201ENST00000557911 754 ntBASIC3.81□□□□□ -1.8
GDE1Q9NZC3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.81□□□□□ -1.8
GDE1Q9NZC3 MTATP6P24-201ENST00000576835 677 ntBASIC3.81□□□□□ -1.8
GDE1Q9NZC3 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.81□□□□□ -1.8
GDE1Q9NZC3 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.81□□□□□ -1.8
GDE1Q9NZC3 VN1R78P-201ENST00000597393 564 ntBASIC3.81□□□□□ -1.8
GDE1Q9NZC3 AC020914.4-201ENST00000597690 277 ntBASIC3.81□□□□□ -1.8
GDE1Q9NZC3 AL355365.1-201ENST00000616480 294 ntBASIC3.81□□□□□ -1.8
GDE1Q9NZC3 AC021755.4-201ENST00000616620 456 ntBASIC3.81□□□□□ -1.8
GDE1Q9NZC3 AP000676.4-201ENST00000624659 623 ntBASIC3.81□□□□□ -1.8
GDE1Q9NZC3 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.81□□□□□ -1.8
GDE1Q9NZC3 AC244517.1-201ENST00000606030 2086 ntBASIC3.81□□□□□ -1.8
GDE1Q9NZC3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
GDE1Q9NZC3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
GDE1Q9NZC3 AC007823.1-201ENST00000569932 1566 ntBASIC3.8□□□□□ -1.8
GDE1Q9NZC3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 RNU1-33P-201ENST00000364249 162 ntBASIC3.8□□□□□ -1.8
GDE1Q9NZC3 SNORA7.2-201ENST00000364446 145 ntBASIC3.8□□□□□ -1.8
GDE1Q9NZC3 RNA5SP235-201ENST00000365411 114 ntBASIC3.8□□□□□ -1.8
GDE1Q9NZC3 MIR490-201ENST00000384865 128 ntBASIC3.8□□□□□ -1.8
GDE1Q9NZC3 MIR513A2-201ENST00000385249 127 ntBASIC3.8□□□□□ -1.8
GDE1Q9NZC3 BX842559.1-201ENST00000419615 532 ntBASIC3.8□□□□□ -1.8
GDE1Q9NZC3 AC010099.3-201ENST00000423896 409 ntBASIC3.8□□□□□ -1.8
GDE1Q9NZC3 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 AL590233.1-201ENST00000430017 456 ntBASIC3.8□□□□□ -1.8
GDE1Q9NZC3 MTND1P32-201ENST00000433043 938 ntBASIC3.8□□□□□ -1.8
GDE1Q9NZC3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 ANP32BP2-201ENST00000454525 545 ntBASIC3.8□□□□□ -1.8
GDE1Q9NZC3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 RN7SL807P-201ENST00000470923 297 ntBASIC3.8□□□□□ -1.8
GDE1Q9NZC3 RPS26P15-201ENST00000488067 348 ntBASIC3.8□□□□□ -1.8
GDE1Q9NZC3 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 AC021146.8-201ENST00000507455 733 ntBASIC3.8□□□□□ -1.8
GDE1Q9NZC3 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 SNORA3.4-201ENST00000515969 96 ntBASIC3.8□□□□□ -1.8
GDE1Q9NZC3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 AP000889.1-201ENST00000530968 660 ntBASIC3.8□□□□□ -1.8
GDE1Q9NZC3 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.8□□□□□ -1.8
GDE1Q9NZC3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 AL031281.1-201ENST00000604049 488 ntBASIC3.8□□□□□ -1.8
GDE1Q9NZC3 HMGB1P50-201ENST00000605814 607 ntBASIC3.8□□□□□ -1.8
GDE1Q9NZC3 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.8□□□□□ -1.8
GDE1Q9NZC3 FAM35DP-201ENST00000323387 2712 ntBASIC3.8□□□□□ -1.8
GDE1Q9NZC3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.8□□□□□ -1.8
GDE1Q9NZC3 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.8□□□□□ -1.8
GDE1Q9NZC3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.79□□□□□ -1.8
GDE1Q9NZC3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GDE1Q9NZC3 AC004925.1-201ENST00000624256 2706 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms