Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AC026410.2-201ENST00000460281 156 ntBASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 RN7SL330P-201ENST00000469709 307 ntBASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 RPS15AP17-201ENST00000470598 390 ntBASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 OR4G11P-201ENST00000492842 939 ntBASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 HMGB1P28-201ENST00000507778 552 ntBASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 SNORA70.19-201ENST00000516717 90 ntBASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 OR4K7P-201ENST00000580232 945 ntBASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 AC022662.1-201ENST00000580252 331 ntBASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 MIR6075-201ENST00000620782 95 ntBASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 AL392088.2-201ENST00000637607 285 ntBASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 USP8P1-201ENST00000494673 3183 ntBASIC4.42□□□□□ -1.7
SMC4Q9NTJ3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 RNA5SP197-201ENST00000363357 119 ntBASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 Y_RNA.465-201ENST00000384293 102 ntBASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 ANAPC10P1-201ENST00000395991 556 ntBASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 TRGVB-201ENST00000453257 471 ntBASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 AL445669.2-201ENST00000454425 421 ntBASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 RPL7P38-201ENST00000488396 739 ntBASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 AC114981.1-201ENST00000503897 678 ntBASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 AC020699.1-201ENST00000505161 445 ntBASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 AC079395.1-201ENST00000510981 262 ntBASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 HSPA8P13-201ENST00000523715 472 ntBASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 EEF1B2P4-201ENST00000551398 348 ntBASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 AL158211.1-201ENST00000566763 763 ntBASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 AC012182.1-201ENST00000570133 895 ntBASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 MIR4429-201ENST00000580105 73 ntBASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 AC068787.1-201ENST00000623908 691 ntBASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 AC008993.2-201ENST00000631744 806 ntBASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SMC4Q9NTJ3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
SMC4Q9NTJ3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.4□□□□□ -1.7
SMC4Q9NTJ3 RNA5SP258-201ENST00000362750 119 ntBASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 RNU6-1122P-201ENST00000384449 107 ntBASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 RNU6-878P-201ENST00000384578 110 ntBASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 SNRPEP2-201ENST00000397592 279 ntBASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 RNU4-78P-201ENST00000410940 126 ntBASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 Z99755.1-201ENST00000414048 380 ntBASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 AL389915.1-201ENST00000422463 466 ntBASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 ARF4P2-201ENST00000430209 526 ntBASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 AL138799.3-201ENST00000438968 350 ntBASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 PDSS1P2-201ENST00000449397 678 ntBASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 HMGB3P8-201ENST00000449709 577 ntBASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 MRPS31P2-201ENST00000451581 518 ntBASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 RPL21P134-201ENST00000453468 483 ntBASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 RPL18AP17-201ENST00000455326 198 ntBASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 NCOR1P1-202ENST00000486162 291 ntBASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 WBP1LP4-201ENST00000505043 344 ntBASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 AC109445.1-201ENST00000512356 383 ntBASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 AC104986.1-201ENST00000517978 436 ntBASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 AC009220.3-201ENST00000604318 586 ntBASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 AC080013.4-201ENST00000607624 649 ntBASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 AC006963.1-201ENST00000624003 1052 ntBASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 AC244258.1-201ENST00000637553 1071 ntBASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 OR8B1P-202ENST00000641132 1178 ntBASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
SMC4Q9NTJ3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms