Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC095057.3-201ENST00000567102 1157 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.9□□□□□ -1.95
TREX1Q9NSU2 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.9□□□□□ -1.95
TREX1Q9NSU2 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.9□□□□□ -1.95
TREX1Q9NSU2 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.9□□□□□ -1.95
TREX1Q9NSU2 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.9□□□□□ -1.95
TREX1Q9NSU2 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.9□□□□□ -1.95
TREX1Q9NSU2 AC096947.1-201ENST00000603233 470 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 BNIP3P4-201ENST00000604946 565 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 AC021851.1-201ENST00000608537 1082 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 AL020991.1-201ENST00000612314 373 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 AC018755.4-201ENST00000619715 454 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 AP003122.6-201ENST00000623831 495 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 MIR3651-201ENST00000630427 90 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 AC132825.7-201ENST00000638744 335 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
TREX1Q9NSU2 AL359893.1-201ENST00000447628 1580 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 AC093908.1-201ENST00000623125 8092 ntBASIC2.9□□□□□ -1.95
TREX1Q9NSU2 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TREX1Q9NSU2 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TREX1Q9NSU2 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TREX1Q9NSU2 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
TREX1Q9NSU2 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TREX1Q9NSU2 RNU6-1226P-201ENST00000384317 107 ntBASIC2.89□□□□□ -1.95
TREX1Q9NSU2 RNU6-1151P-201ENST00000384684 107 ntBASIC2.89□□□□□ -1.95
TREX1Q9NSU2 SNORA48.5-201ENST00000391143 135 ntBASIC2.89□□□□□ -1.95
TREX1Q9NSU2 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.89□□□□□ -1.95
TREX1Q9NSU2 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.89□□□□□ -1.95
TREX1Q9NSU2 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.89□□□□□ -1.95
TREX1Q9NSU2 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.89□□□□□ -1.95
TREX1Q9NSU2 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.89□□□□□ -1.95
TREX1Q9NSU2 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TREX1Q9NSU2 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.89□□□□□ -1.95
TREX1Q9NSU2 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TREX1Q9NSU2 AC105914.1-201ENST00000511798 226 ntBASIC2.89□□□□□ -1.95
TREX1Q9NSU2 SETP12-201ENST00000514068 805 ntBASIC2.89□□□□□ -1.95
TREX1Q9NSU2 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.89□□□□□ -1.95
TREX1Q9NSU2 RNA5SP385-201ENST00000515947 110 ntBASIC2.89□□□□□ -1.95
TREX1Q9NSU2 SNORA76.2-201ENST00000517095 137 ntBASIC2.89□□□□□ -1.95
TREX1Q9NSU2 AP002404.1-201ENST00000532005 451 ntBASIC2.89□□□□□ -1.95
TREX1Q9NSU2 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.89□□□□□ -1.95
TREX1Q9NSU2 AC092470.1-201ENST00000546187 132 ntBASIC2.89□□□□□ -1.95
TREX1Q9NSU2 AC107016.2-201ENST00000547968 190 ntBASIC2.89□□□□□ -1.95
TREX1Q9NSU2 AL121603.1-201ENST00000553815 142 ntBASIC2.89□□□□□ -1.95
TREX1Q9NSU2 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.89□□□□□ -1.95
TREX1Q9NSU2 LINC00557-201ENST00000563184 1279 ntBASIC2.89□□□□□ -1.95
TREX1Q9NSU2 AC006116.7-201ENST00000590141 756 ntBASIC2.89□□□□□ -1.95
TREX1Q9NSU2 AC012119.1-201ENST00000603184 222 ntBASIC2.89□□□□□ -1.95
TREX1Q9NSU2 AC113368.1-201ENST00000603736 382 ntBASIC2.89□□□□□ -1.95
TREX1Q9NSU2 AC007179.3-201ENST00000604976 235 ntBASIC2.89□□□□□ -1.95
TREX1Q9NSU2 AC245100.7-201ENST00000609678 442 ntBASIC2.89□□□□□ -1.95
TREX1Q9NSU2 AL355493.4-201ENST00000618530 292 ntBASIC2.89□□□□□ -1.95
TREX1Q9NSU2 AC009039.2-201ENST00000624524 529 ntBASIC2.89□□□□□ -1.95
TREX1Q9NSU2 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.89□□□□□ -1.95
TREX1Q9NSU2 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.89□□□□□ -1.95
TREX1Q9NSU2 ZNF734P-201ENST00000419494 1534 ntBASIC2.88□□□□□ -1.95
TREX1Q9NSU2 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TREX1Q9NSU2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TREX1Q9NSU2 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TREX1Q9NSU2 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.88□□□□□ -1.95
TREX1Q9NSU2 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
TREX1Q9NSU2 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TREX1Q9NSU2 MIR422A-201ENST00000362286 90 ntBASIC2.88□□□□□ -1.95
TREX1Q9NSU2 RNU6-444P-201ENST00000383988 108 ntBASIC2.88□□□□□ -1.95
TREX1Q9NSU2 Y_RNA.493-201ENST00000384422 102 ntBASIC2.88□□□□□ -1.95
TREX1Q9NSU2 MIR181A2-201ENST00000384863 110 ntBASIC2.88□□□□□ -1.95
TREX1Q9NSU2 MIR512-1-201ENST00000384913 84 ntBASIC2.88□□□□□ -1.95
TREX1Q9NSU2 RAD23BP2-201ENST00000416003 1207 ntBASIC2.88□□□□□ -1.95
TREX1Q9NSU2 SDCBPP3-201ENST00000419629 891 ntBASIC2.88□□□□□ -1.95
TREX1Q9NSU2 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.88□□□□□ -1.95
TREX1Q9NSU2 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.88□□□□□ -1.95
TREX1Q9NSU2 AC093156.1-201ENST00000440382 670 ntBASIC2.88□□□□□ -1.95
TREX1Q9NSU2 AC005002.1-201ENST00000447458 540 ntBASIC2.88□□□□□ -1.95
TREX1Q9NSU2 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TREX1Q9NSU2 RNU6-1102P-201ENST00000516149 96 ntBASIC2.88□□□□□ -1.95
TREX1Q9NSU2 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.88□□□□□ -1.95
TREX1Q9NSU2 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
TREX1Q9NSU2 ERHP1-201ENST00000523006 310 ntBASIC2.88□□□□□ -1.95
TREX1Q9NSU2 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.88□□□□□ -1.95
TREX1Q9NSU2 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.88□□□□□ -1.95
TREX1Q9NSU2 FAM60DP-201ENST00000524174 632 ntBASIC2.88□□□□□ -1.95
TREX1Q9NSU2 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.88□□□□□ -1.95
TREX1Q9NSU2 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.88□□□□□ -1.95
TREX1Q9NSU2 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.88□□□□□ -1.95
TREX1Q9NSU2 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.88□□□□□ -1.95
TREX1Q9NSU2 VN1R88P-201ENST00000596787 292 ntBASIC2.88□□□□□ -1.95
TREX1Q9NSU2 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.88□□□□□ -1.95
TREX1Q9NSU2 AC012468.1-201ENST00000604888 430 ntBASIC2.88□□□□□ -1.95
TREX1Q9NSU2 AC096577.2-201ENST00000611455 153 ntBASIC2.88□□□□□ -1.95
TREX1Q9NSU2 AC131902.3-201ENST00000611767 581 ntBASIC2.88□□□□□ -1.95
TREX1Q9NSU2 AC092650.2-201ENST00000619984 902 ntBASIC2.88□□□□□ -1.95
TREX1Q9NSU2 AC006249.1-201ENST00000621223 471 ntBASIC2.88□□□□□ -1.95
TREX1Q9NSU2 AC022509.4-201ENST00000621404 572 ntBASIC2.88□□□□□ -1.95
TREX1Q9NSU2 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TREX1Q9NSU2 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
TREX1Q9NSU2 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.88□□□□□ -1.95
TREX1Q9NSU2 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.88□□□□□ -1.95
TREX1Q9NSU2 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TREX1Q9NSU2 ZNF807-201ENST00000328088 1707 ntBASIC2.88□□□□□ -1.95
TREX1Q9NSU2 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms