Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.64□□□□□ -1.99
CISHQ9NSE2 RPL23AP45-201ENST00000476406 468 ntBASIC2.64□□□□□ -1.99
CISHQ9NSE2 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CISHQ9NSE2 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.64□□□□□ -1.99
CISHQ9NSE2 HMGB1P22-201ENST00000505315 124 ntBASIC2.64□□□□□ -1.99
CISHQ9NSE2 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.64□□□□□ -1.99
CISHQ9NSE2 RN7SKP282-201ENST00000516824 299 ntBASIC2.64□□□□□ -1.99
CISHQ9NSE2 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.64□□□□□ -1.99
CISHQ9NSE2 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.64□□□□□ -1.99
CISHQ9NSE2 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.64□□□□□ -1.99
CISHQ9NSE2 RPL23AP84-201ENST00000571193 464 ntBASIC2.64□□□□□ -1.99
CISHQ9NSE2 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.64□□□□□ -1.99
CISHQ9NSE2 NRBF2P5-201ENST00000603087 788 ntBASIC2.64□□□□□ -1.99
CISHQ9NSE2 RPL12P50-201ENST00000603116 116 ntBASIC2.64□□□□□ -1.99
CISHQ9NSE2 YWHAQP7-201ENST00000603536 658 ntBASIC2.64□□□□□ -1.99
CISHQ9NSE2 AL049780.3-201ENST00000624612 1583 ntBASIC2.64□□□□□ -1.99
CISHQ9NSE2 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CISHQ9NSE2 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CISHQ9NSE2 AL355578.1-201ENST00000607405 1328 ntBASIC2.64□□□□□ -1.99
CISHQ9NSE2 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.64□□□□□ -1.99
CISHQ9NSE2 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
CISHQ9NSE2 AC103988.1-201ENST00000566382 2177 ntBASIC2.63□□□□□ -1.99
CISHQ9NSE2 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.63□□□□□ -1.99
CISHQ9NSE2 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
CISHQ9NSE2 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CISHQ9NSE2 U3.12-201ENST00000364498 214 ntBASIC2.63□□□□□ -1.99
CISHQ9NSE2 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.63□□□□□ -1.99
CISHQ9NSE2 DEFB109C-201ENST00000382575 264 ntBASIC2.63□□□□□ -1.99
CISHQ9NSE2 DEFB109B-201ENST00000382656 264 ntBASIC2.63□□□□□ -1.99
CISHQ9NSE2 AL162578.1-201ENST00000406202 378 ntBASIC2.63□□□□□ -1.99
CISHQ9NSE2 AC109780.2-201ENST00000413467 845 ntBASIC2.63□□□□□ -1.99
CISHQ9NSE2 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.63□□□□□ -1.99
CISHQ9NSE2 MTCO2P17-201ENST00000424336 677 ntBASIC2.63□□□□□ -1.99
CISHQ9NSE2 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.63□□□□□ -1.99
CISHQ9NSE2 FCF1P1-201ENST00000432690 571 ntBASIC2.63□□□□□ -1.99
CISHQ9NSE2 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.63□□□□□ -1.99
CISHQ9NSE2 TPTE2P6-202ENST00000445572 1007 ntBASIC2.63□□□□□ -1.99
CISHQ9NSE2 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CISHQ9NSE2 snoU13.7-201ENST00000459220 104 ntBASIC2.63□□□□□ -1.99
CISHQ9NSE2 AC108860.1-201ENST00000484521 383 ntBASIC2.63□□□□□ -1.99
CISHQ9NSE2 AL024509.2-201ENST00000493462 493 ntBASIC2.63□□□□□ -1.99
CISHQ9NSE2 AC098799.1-201ENST00000504752 800 ntBASIC2.63□□□□□ -1.99
CISHQ9NSE2 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.63□□□□□ -1.99
CISHQ9NSE2 SNORD59.2-201ENST00000516873 68 ntBASIC2.63□□□□□ -1.99
CISHQ9NSE2 RNU6-711P-201ENST00000517255 106 ntBASIC2.63□□□□□ -1.99
CISHQ9NSE2 AC239860.2-201ENST00000525886 270 ntBASIC2.63□□□□□ -1.99
CISHQ9NSE2 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.63□□□□□ -1.99
CISHQ9NSE2 AP003717.3-201ENST00000544832 1180 ntBASIC2.63□□□□□ -1.99
CISHQ9NSE2 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.63□□□□□ -1.99
CISHQ9NSE2 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.63□□□□□ -1.99
CISHQ9NSE2 AC027176.1-201ENST00000560204 514 ntBASIC2.63□□□□□ -1.99
CISHQ9NSE2 AC034268.2-201ENST00000571784 482 ntBASIC2.63□□□□□ -1.99
CISHQ9NSE2 MAGOH2P-202ENST00000584384 429 ntBASIC2.63□□□□□ -1.99
CISHQ9NSE2 AC010620.2-201ENST00000600135 313 ntBASIC2.63□□□□□ -1.99
CISHQ9NSE2 MTCO3P22-201ENST00000603219 784 ntBASIC2.63□□□□□ -1.99
CISHQ9NSE2 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CISHQ9NSE2 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.63□□□□□ -1.99
CISHQ9NSE2 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.63□□□□□ -1.99
CISHQ9NSE2 CUL1P1-201ENST00000509510 2425 ntBASIC2.63□□□□□ -1.99
CISHQ9NSE2 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CISHQ9NSE2 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CISHQ9NSE2 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
CISHQ9NSE2 MAPK10-266ENST00000641066 6555 ntBASIC2.62□□□□□ -1.99
CISHQ9NSE2 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.62□□□□□ -1.99
CISHQ9NSE2 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
CISHQ9NSE2 RNU6-891P-201ENST00000384280 111 ntBASIC2.62□□□□□ -1.99
CISHQ9NSE2 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.62□□□□□ -1.99
CISHQ9NSE2 AL359511.1-201ENST00000402970 211 ntBASIC2.62□□□□□ -1.99
CISHQ9NSE2 BTBD10P2-201ENST00000404779 676 ntBASIC2.62□□□□□ -1.99
CISHQ9NSE2 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.62□□□□□ -1.99
CISHQ9NSE2 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CISHQ9NSE2 SAR1AP4-201ENST00000429225 591 ntBASIC2.62□□□□□ -1.99
CISHQ9NSE2 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.62□□□□□ -1.99
CISHQ9NSE2 RPS27P5-201ENST00000444247 244 ntBASIC2.62□□□□□ -1.99
CISHQ9NSE2 RPL39P40-201ENST00000445481 146 ntBASIC2.62□□□□□ -1.99
CISHQ9NSE2 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.62□□□□□ -1.99
CISHQ9NSE2 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CISHQ9NSE2 OR6K1P-201ENST00000456766 971 ntBASIC2.62□□□□□ -1.99
CISHQ9NSE2 RPL31P50-201ENST00000471002 296 ntBASIC2.62□□□□□ -1.99
CISHQ9NSE2 TBCAP3-201ENST00000512475 312 ntBASIC2.62□□□□□ -1.99
CISHQ9NSE2 AC090136.1-201ENST00000520009 240 ntBASIC2.62□□□□□ -1.99
CISHQ9NSE2 RPL7P20-201ENST00000520308 745 ntBASIC2.62□□□□□ -1.99
CISHQ9NSE2 AC109635.4-202ENST00000531666 412 ntBASIC2.62□□□□□ -1.99
CISHQ9NSE2 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.62□□□□□ -1.99
CISHQ9NSE2 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.62□□□□□ -1.99
CISHQ9NSE2 MIR4672-201ENST00000583126 81 ntBASIC2.62□□□□□ -1.99
CISHQ9NSE2 BDH2P1-201ENST00000602288 736 ntBASIC2.62□□□□□ -1.99
CISHQ9NSE2 AC007621.1-201ENST00000604544 437 ntBASIC2.62□□□□□ -1.99
CISHQ9NSE2 AL590282.1-201ENST00000610379 1136 ntBASIC2.62□□□□□ -1.99
CISHQ9NSE2 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.62□□□□□ -1.99
CISHQ9NSE2 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.62□□□□□ -1.99
CISHQ9NSE2 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CISHQ9NSE2 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.61□□□□□ -1.99
CISHQ9NSE2 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
CISHQ9NSE2 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.61□□□□□ -1.99
CISHQ9NSE2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CISHQ9NSE2 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CISHQ9NSE2 AL672167.1-206ENST00000356293 943 ntBASIC2.61□□□□□ -1.99
CISHQ9NSE2 RNU6-629P-201ENST00000384061 103 ntBASIC2.61□□□□□ -1.99
CISHQ9NSE2 ARF4P3-201ENST00000397387 509 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms