Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC2.58□□□□□ -2
UBQLN4Q9NRR5 AC006111.3-201ENST00000622137 383 ntBASIC2.58□□□□□ -2
UBQLN4Q9NRR5 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.58□□□□□ -2
UBQLN4Q9NRR5 AC090617.7-201ENST00000623952 126 ntBASIC2.58□□□□□ -2
UBQLN4Q9NRR5 AP001002.2-201ENST00000625137 386 ntBASIC2.58□□□□□ -2
UBQLN4Q9NRR5 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.58□□□□□ -2
UBQLN4Q9NRR5 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.58□□□□□ -2
UBQLN4Q9NRR5 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 RNVU1-3-201ENST00000364313 161 ntBASIC2.57□□□□□ -2
UBQLN4Q9NRR5 SNORA11.1-201ENST00000408133 129 ntBASIC2.57□□□□□ -2
UBQLN4Q9NRR5 ZNF92P1Y-201ENST00000415010 1191 ntBASIC2.57□□□□□ -2
UBQLN4Q9NRR5 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.57□□□□□ -2
UBQLN4Q9NRR5 AL645937.1-202ENST00000421799 937 ntBASIC2.57□□□□□ -2
UBQLN4Q9NRR5 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 AC114973.1-201ENST00000429057 632 ntBASIC2.57□□□□□ -2
UBQLN4Q9NRR5 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 AC010881.1-201ENST00000433830 235 ntBASIC2.57□□□□□ -2
UBQLN4Q9NRR5 TPTE2P1-204ENST00000435256 593 ntBASIC2.57□□□□□ -2
UBQLN4Q9NRR5 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 CYCSP32-201ENST00000440548 321 ntBASIC2.57□□□□□ -2
UBQLN4Q9NRR5 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 AC112653.1-201ENST00000443851 386 ntBASIC2.57□□□□□ -2
UBQLN4Q9NRR5 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 AC015724.1-201ENST00000478577 156 ntBASIC2.57□□□□□ -2
UBQLN4Q9NRR5 AC098799.2-201ENST00000509466 868 ntBASIC2.57□□□□□ -2
UBQLN4Q9NRR5 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 RNU6-56P-201ENST00000516986 93 ntBASIC2.57□□□□□ -2
UBQLN4Q9NRR5 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 AP001029.3-201ENST00000588063 596 ntBASIC2.57□□□□□ -2
UBQLN4Q9NRR5 AC023043.3-201ENST00000593113 385 ntBASIC2.57□□□□□ -2
UBQLN4Q9NRR5 XIAPP1-201ENST00000603162 600 ntBASIC2.57□□□□□ -2
UBQLN4Q9NRR5 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 AC083865.1-201ENST00000636634 831 ntBASIC2.57□□□□□ -2
UBQLN4Q9NRR5 FAM35BP-202ENST00000497389 3337 ntBASIC2.57□□□□□ -2
UBQLN4Q9NRR5 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.57□□□□□ -2
UBQLN4Q9NRR5 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
UBQLN4Q9NRR5 ENSAP3-201ENST00000312710 333 ntBASIC2.56□□□□□ -2
UBQLN4Q9NRR5 MIR128-1-201ENST00000384921 82 ntBASIC2.56□□□□□ -2
UBQLN4Q9NRR5 SNORA48.2-201ENST00000390926 124 ntBASIC2.56□□□□□ -2
UBQLN4Q9NRR5 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.56□□□□□ -2
UBQLN4Q9NRR5 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.56□□□□□ -2
UBQLN4Q9NRR5 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.56□□□□□ -2
UBQLN4Q9NRR5 OR6K1P-201ENST00000456766 971 ntBASIC2.56□□□□□ -2
UBQLN4Q9NRR5 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.56□□□□□ -2
UBQLN4Q9NRR5 HMGB1P25-201ENST00000468402 607 ntBASIC2.56□□□□□ -2
UBQLN4Q9NRR5 AC003982.1-202ENST00000469928 248 ntBASIC2.56□□□□□ -2
UBQLN4Q9NRR5 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.56□□□□□ -2
UBQLN4Q9NRR5 RPS27AP9-201ENST00000477681 438 ntBASIC2.56□□□□□ -2
UBQLN4Q9NRR5 AP001025.2-201ENST00000490908 477 ntBASIC2.56□□□□□ -2
UBQLN4Q9NRR5 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.56□□□□□ -2
UBQLN4Q9NRR5 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.56□□□□□ -2
UBQLN4Q9NRR5 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.56□□□□□ -2
UBQLN4Q9NRR5 HIGD1AP13-201ENST00000509878 289 ntBASIC2.56□□□□□ -2
UBQLN4Q9NRR5 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.56□□□□□ -2
UBQLN4Q9NRR5 MTCO3P44-201ENST00000510977 541 ntBASIC2.56□□□□□ -2
UBQLN4Q9NRR5 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.56□□□□□ -2
UBQLN4Q9NRR5 AC091826.1-201ENST00000514065 313 ntBASIC2.56□□□□□ -2
UBQLN4Q9NRR5 RNU6-488P-201ENST00000515918 99 ntBASIC2.56□□□□□ -2
UBQLN4Q9NRR5 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.56□□□□□ -2
UBQLN4Q9NRR5 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.56□□□□□ -2
UBQLN4Q9NRR5 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.56□□□□□ -2
UBQLN4Q9NRR5 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.56□□□□□ -2
UBQLN4Q9NRR5 COX6CP3-201ENST00000580869 223 ntBASIC2.56□□□□□ -2
UBQLN4Q9NRR5 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
UBQLN4Q9NRR5 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.56□□□□□ -2
UBQLN4Q9NRR5 AC103881.1-201ENST00000603476 538 ntBASIC2.56□□□□□ -2
UBQLN4Q9NRR5 AC008277.2-201ENST00000605196 797 ntBASIC2.56□□□□□ -2
UBQLN4Q9NRR5 AC018755.4-201ENST00000619715 454 ntBASIC2.56□□□□□ -2
UBQLN4Q9NRR5 AC095031.1-201ENST00000623685 672 ntBASIC2.56□□□□□ -2
UBQLN4Q9NRR5 AC090617.9-201ENST00000623751 147 ntBASIC2.56□□□□□ -2
UBQLN4Q9NRR5 AC068620.4-201ENST00000636730 1182 ntBASIC2.56□□□□□ -2
UBQLN4Q9NRR5 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.56□□□□□ -2
UBQLN4Q9NRR5 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.56□□□□□ -2
UBQLN4Q9NRR5 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
UBQLN4Q9NRR5 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
UBQLN4Q9NRR5 AC010733.2-201ENST00000589496 5702 ntBASIC2.55□□□□□ -2
UBQLN4Q9NRR5 GNG5P1-201ENST00000255500 204 ntBASIC2.55□□□□□ -2
UBQLN4Q9NRR5 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.55□□□□□ -2
UBQLN4Q9NRR5 RNA5SP258-201ENST00000362750 119 ntBASIC2.55□□□□□ -2
UBQLN4Q9NRR5 SNORD115-48-201ENST00000364764 76 ntBASIC2.55□□□□□ -2
UBQLN4Q9NRR5 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms