Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.11□□□□□ -1.75
NRIP3Q9NQ35 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.11□□□□□ -1.75
NRIP3Q9NQ35 AC108479.2-201ENST00000617314 601 ntBASIC4.11□□□□□ -1.75
NRIP3Q9NQ35 AL713922.2-201ENST00000619384 716 ntBASIC4.11□□□□□ -1.75
NRIP3Q9NQ35 AC068870.2-201ENST00000620635 389 ntBASIC4.11□□□□□ -1.75
NRIP3Q9NQ35 AC091905.2-201ENST00000623143 306 ntBASIC4.11□□□□□ -1.75
NRIP3Q9NQ35 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.11□□□□□ -1.75
NRIP3Q9NQ35 FER-210ENST00000628534 558 ntTSL 5 BASIC4.11□□□□□ -1.75
NRIP3Q9NQ35 AC138649.5-201ENST00000637456 137 ntBASIC4.11□□□□□ -1.75
NRIP3Q9NQ35 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NRIP3Q9NQ35 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NRIP3Q9NQ35 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.11□□□□□ -1.75
NRIP3Q9NQ35 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.11□□□□□ -1.75
NRIP3Q9NQ35 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
NRIP3Q9NQ35 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
NRIP3Q9NQ35 ZNF680P1-201ENST00000436625 1469 ntBASIC4.11□□□□□ -1.75
NRIP3Q9NQ35 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NRIP3Q9NQ35 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
NRIP3Q9NQ35 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NRIP3Q9NQ35 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 FAM91A3P-201ENST00000456826 2544 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 Y_RNA.1-201ENST00000352915 104 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 RNA5SP502-201ENST00000362694 119 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 XGY1-201ENST00000381172 446 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 Y_RNA.529-201ENST00000384586 119 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 RNU2-28P-201ENST00000410457 189 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 RN7SKP216-201ENST00000411050 312 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 AL359704.1-201ENST00000411586 781 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 USP9YP27-201ENST00000418455 438 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 RPL23AP25-201ENST00000430973 463 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 RPL31P35-201ENST00000431058 377 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 LYPLA1P1-201ENST00000434514 622 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 AL627308.1-201ENST00000435693 821 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 PSMD10P3-201ENST00000437000 448 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 CEACAMP9-201ENST00000442990 513 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 C1DP4-201ENST00000455429 424 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 POU5F1P7-201ENST00000508759 541 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 AC135001.1-201ENST00000544546 283 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 AL157687.1-201ENST00000554853 619 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 AL157394.1-201ENST00000562983 1224 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 AC107954.1-201ENST00000565906 727 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 MTND6P33-201ENST00000571794 183 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 RPL12P25-202ENST00000598100 674 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 AC005034.5-201ENST00000604219 466 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 AC112187.2-201ENST00000604345 283 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 AC128687.2-201ENST00000609657 566 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 AL139089.1-201ENST00000620372 975 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 MIR7154-201ENST00000620673 73 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 U3.53-201ENST00000628922 216 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 MIR3662-201ENST00000637030 95 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 MIR1321-201ENST00000637766 79 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 AC010928.1-201ENST00000592477 1447 ntBASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NRIP3Q9NQ35 MAPK10-263ENST00000641052 4307 ntBASIC4.09□□□□□ -1.75
NRIP3Q9NQ35 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NRIP3Q9NQ35 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NRIP3Q9NQ35 ZNF137P-201ENST00000456718 1920 ntBASIC4.09□□□□□ -1.75
NRIP3Q9NQ35 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.09□□□□□ -1.75
NRIP3Q9NQ35 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NRIP3Q9NQ35 RNU1-85P-201ENST00000364127 164 ntBASIC4.09□□□□□ -1.75
NRIP3Q9NQ35 Y_RNA.279-201ENST00000364763 95 ntBASIC4.09□□□□□ -1.75
NRIP3Q9NQ35 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.09□□□□□ -1.75
NRIP3Q9NQ35 RNU6-441P-201ENST00000384545 106 ntBASIC4.09□□□□□ -1.75
NRIP3Q9NQ35 AC092642.1-201ENST00000392417 425 ntBASIC4.09□□□□□ -1.75
NRIP3Q9NQ35 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NRIP3Q9NQ35 AL109941.1-201ENST00000401925 229 ntBASIC4.09□□□□□ -1.75
NRIP3Q9NQ35 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
NRIP3Q9NQ35 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.09□□□□□ -1.75
NRIP3Q9NQ35 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.09□□□□□ -1.75
NRIP3Q9NQ35 RAD23BP1-201ENST00000421404 1227 ntBASIC4.09□□□□□ -1.75
NRIP3Q9NQ35 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.09□□□□□ -1.75
NRIP3Q9NQ35 AC005517.2-201ENST00000424673 553 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms