Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 Y_RNA.133-201ENST00000363428 110 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VPS11Q9H270 RNU6-474P-201ENST00000384243 107 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 AL603766.1-201ENST00000407763 664 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 MIR1250-201ENST00000408098 113 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 MIR1286-201ENST00000408112 78 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 U3.36-201ENST00000408418 213 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 AC079355.1-201ENST00000421770 223 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS11Q9H270 AC005033.1-201ENST00000428904 813 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 GTF2IP20-201ENST00000431663 360 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 AC002486.1-201ENST00000435098 391 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 AL162388.1-201ENST00000450912 352 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS11Q9H270 AL121877.1-201ENST00000453704 622 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VPS11Q9H270 AL590639.1-201ENST00000456484 337 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS11Q9H270 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS11Q9H270 AC026410.2-201ENST00000460281 156 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 PABPC1P3-201ENST00000469174 459 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS11Q9H270 RN7SL41P-201ENST00000476144 297 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS11Q9H270 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS11Q9H270 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.79□□□□□ -1.64
VPS11Q9H270 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS11Q9H270 AC006499.2-201ENST00000513470 337 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 RN7SKP116-201ENST00000516902 319 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 RNU6-264P-201ENST00000517134 104 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS11Q9H270 AC134698.5-201ENST00000519444 336 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.79□□□□□ -1.64
VPS11Q9H270 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS11Q9H270 DEFB131D-201ENST00000526803 184 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VPS11Q9H270 AC243972.3-201ENST00000539655 198 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS11Q9H270 FKBP1BP1-201ENST00000553366 325 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 AC093249.4-201ENST00000564755 259 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 MIR4691-201ENST00000583764 85 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS11Q9H270 AC008737.2-201ENST00000599446 118 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS11Q9H270 MIR6768-201ENST00000610734 72 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 AL132822.1-201ENST00000617063 513 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 AC139792.3-201ENST00000623525 224 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 AC091905.1-201ENST00000624400 311 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 AC134503.1-201ENST00000633048 54 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.79□□□□□ -1.64
VPS11Q9H270 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VPS11Q9H270 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VPS11Q9H270 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS11Q9H270 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VPS11Q9H270 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
VPS11Q9H270 AC010928.1-201ENST00000592477 1447 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
VPS11Q9H270 AL136164.3-201ENST00000624429 3978 ntBASIC4.79□□□□□ -1.64
VPS11Q9H270 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
VPS11Q9H270 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VPS11Q9H270 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VPS11Q9H270 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS11Q9H270 ZNF734P-201ENST00000419494 1534 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS11Q9H270 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 NMD3P1-201ENST00000439704 1488 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 RNU1-94P-201ENST00000362627 173 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 Y_RNA.145-201ENST00000363527 102 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 RNU6-359P-201ENST00000365466 108 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS11Q9H270 RNU6-784P-201ENST00000384330 106 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 HMGB1P17-201ENST00000403495 628 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 AL359704.1-201ENST00000411586 781 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 HMGB1P11-201ENST00000413899 637 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 OR2AM1P-201ENST00000422137 422 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 AL953862.1-201ENST00000423016 168 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 RPL37P21-201ENST00000435890 276 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 RPL23AP74-201ENST00000437246 471 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS11Q9H270 RABEPKP1-201ENST00000440529 1026 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.78□□□□□ -1.64
VPS11Q9H270 C1DP4-201ENST00000455429 424 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 RN7SL172P-201ENST00000460535 303 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 RPL7P22-201ENST00000466005 733 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 RN7SL222P-201ENST00000476452 299 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VPS11Q9H270 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS11Q9H270 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS11Q9H270 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS11Q9H270 SNRPCP2-201ENST00000504370 475 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 AC093767.1-201ENST00000504523 156 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS11Q9H270 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS11Q9H270 KCTD9P2-201ENST00000512203 1013 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 AC108064.1-201ENST00000513791 460 ntBASIC4.78□□□□□ -1.64
VPS11Q9H270 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS11Q9H270 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.78□□□□□ -1.64
VPS11Q9H270 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms