Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 HMGN1P18-201ENST00000457642 277 ntBASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 snoU109.4-201ENST00000458953 143 ntBASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 HMGB1P25-201ENST00000468402 607 ntBASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 AC021678.1-201ENST00000505195 936 ntBASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 MTCO3P27-201ENST00000514397 196 ntBASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 RNU5A-7P-201ENST00000515979 116 ntBASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 AP003355.1-201ENST00000518956 587 ntBASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 OR4H12P-201ENST00000556269 907 ntBASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 AC044913.1-201ENST00000557200 430 ntBASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 AC092954.1-201ENST00000609121 445 ntBASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 AC092574.1-201ENST00000609771 420 ntBASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 AC106028.5-201ENST00000610332 395 ntBASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 CYP3A51P-201ENST00000633513 256 ntBASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 AC139713.2-210ENST00000641741 992 ntBASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 ZNF807-201ENST00000328088 1707 ntBASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
POLR1EQ9GZS1 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 AL079305.1-201ENST00000623159 3008 ntBASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 RNU6-492P-201ENST00000363035 104 ntBASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 RNU6-1066P-201ENST00000363573 105 ntBASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 RPL21P32-201ENST00000419877 477 ntBASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 AC104308.1-201ENST00000454621 333 ntBASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 BTF3P5-201ENST00000457252 467 ntBASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 RPS4XP22-201ENST00000480755 780 ntBASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 AC013828.1-201ENST00000481845 158 ntBASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 RPL32P34-201ENST00000486380 400 ntBASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 DYNLL1P6-201ENST00000503440 264 ntBASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 BOLA3P3-201ENST00000505182 232 ntBASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 snoZ278.1-201ENST00000517059 112 ntBASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 AC023632.1-201ENST00000518463 375 ntBASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 AC068339.2-201ENST00000534395 618 ntBASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 AC004024.1-201ENST00000549244 247 ntBASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 AC005951.1-201ENST00000576706 485 ntBASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 AC053481.3-201ENST00000577881 843 ntBASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 MIR4666A-201ENST00000580160 79 ntBASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 CKS1BP3-201ENST00000600888 237 ntBASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 AP005137.2-201ENST00000609238 400 ntBASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 AC009464.1-201ENST00000615731 469 ntBASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 VN1R7P-201ENST00000619242 903 ntBASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 AC091925.2-201ENST00000625059 256 ntBASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
POLR1EQ9GZS1 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 OR5H2-201ENST00000355273 945 ntBASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 RNU6-173P-201ENST00000364215 104 ntBASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 U3.19-201ENST00000390893 196 ntBASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 AC016769.3-201ENST00000396562 315 ntBASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 RPS3AP26-201ENST00000398259 784 ntBASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 AL035405.1-201ENST00000400795 710 ntBASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 SKINT1L-201ENST00000401057 817 ntBASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 AL355615.1-201ENST00000406187 641 ntBASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 AC092634.6-201ENST00000418558 192 ntBASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 RPS4XP10-201ENST00000465034 731 ntBASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 RN7SL601P-201ENST00000471221 293 ntBASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 RPL7P5-201ENST00000471472 736 ntBASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 SNORA48.10-201ENST00000516965 160 ntBASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.3□□□□□ -1.88
POLR1EQ9GZS1 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms