Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.19□□□□□ -1.58
FOXP3Q9BZS1 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 DDX18P3-201ENST00000404856 2007 ntBASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 AC107068.1-201ENST00000563286 4218 ntBASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 Y_RNA.231-201ENST00000364358 102 ntBASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 SNORA4.3-201ENST00000365564 137 ntBASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 SNORD42.2-201ENST00000365570 69 ntBASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 AL109941.1-201ENST00000401925 229 ntBASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 VN1R36P-201ENST00000414936 291 ntBASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 AC007547.1-201ENST00000462177 490 ntBASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 RN7SL517P-201ENST00000462240 305 ntBASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 KLHL2P1-201ENST00000508691 521 ntBASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 RN7SKP256-201ENST00000517201 314 ntBASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 AP000676.2-201ENST00000529711 301 ntBASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 OR5D15P-201ENST00000531671 942 ntBASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 AC005868.1-201ENST00000536421 331 ntBASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 CYCSP40-201ENST00000575927 294 ntBASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 AC105224.1-201ENST00000587055 421 ntBASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 Z98200.1-201ENST00000607298 470 ntBASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 AC079684.1-201ENST00000621405 437 ntBASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 AC000123.2-201ENST00000623124 461 ntBASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 SCARNA15-201ENST00000607520 4325 ntBASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 ASNSP3-201ENST00000451989 1306 ntBASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 MTCO1P9-201ENST00000505577 1534 ntBASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
FOXP3Q9BZS1 AC130650.2-201ENST00000618736 2403 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 AC092079.1-201ENST00000558620 1985 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 AC090229.1-201ENST00000590983 1609 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 RNU4-48P-201ENST00000365559 182 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 Y_RNA.422-201ENST00000384054 114 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 RNU6-1160P-201ENST00000384546 104 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 MIR514A2-201ENST00000385131 88 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 MIR514A3-201ENST00000385132 88 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 RNU6-193P-201ENST00000410977 107 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 AC073136.2-201ENST00000417282 849 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 RPL31P45-201ENST00000419532 356 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 AC012065.2-201ENST00000421295 375 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 EI24P4-201ENST00000423683 1078 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 CKS1BP6-201ENST00000424932 240 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 AL590233.1-201ENST00000430017 456 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 GTF2IP13-201ENST00000438487 386 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 AC108734.1-201ENST00000439549 399 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 AC093156.1-201ENST00000440382 670 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 AL450023.3-201ENST00000440592 271 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 AC114495.1-201ENST00000441274 436 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 AC006480.1-201ENST00000449887 378 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 AC022431.1-201ENST00000450941 438 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 MTND3P16-201ENST00000452205 344 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 Y_RNA.639-201ENST00000458981 102 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 AC130509.1-201ENST00000464158 433 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 AC009127.1-201ENST00000467090 155 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 NIP7P2-201ENST00000485801 544 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 RPS4XP20-201ENST00000505751 772 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 AC021146.1-201ENST00000511202 716 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 RNU6-1170P-201ENST00000515974 106 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 ELOCP31-201ENST00000540463 467 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 AL352979.3-201ENST00000553515 247 ntBASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
FOXP3Q9BZS1 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms