Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC112220.1-201ENST00000434628 355 ntBASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 HMGB1P48-201ENST00000446155 598 ntBASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 snoU13.7-201ENST00000459220 104 ntBASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 SUMO1P1-201ENST00000497904 306 ntBASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 HIGD1AP13-201ENST00000509878 289 ntBASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 AC079600.2-201ENST00000550076 130 ntBASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 HMGB1P6-201ENST00000569046 646 ntBASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 AC012182.1-201ENST00000570133 895 ntBASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 AC138761.3-201ENST00000579993 334 ntBASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 AC023043.3-201ENST00000593113 385 ntBASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 AL035413.2-201ENST00000604801 525 ntBASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 HMGN2P28-201ENST00000606102 262 ntBASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.26□□□□□ -1.89
UPF3BQ9BZI7 AC109315.1-201ENST00000584143 1347 ntBASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 AC062016.1-201ENST00000355719 319 ntBASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 MIR26A1-201ENST00000362205 77 ntBASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 RNU6-1293P-201ENST00000384077 107 ntBASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 RNU1-101P-201ENST00000391171 127 ntBASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 MTCYBP24-201ENST00000420387 1106 ntBASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 AC019097.1-201ENST00000424783 735 ntBASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 OR51AB1P-201ENST00000429046 620 ntBASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 MUPP-201ENST00000438111 566 ntBASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 TPTE2P6-202ENST00000445572 1007 ntBASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 RPL36AP33-201ENST00000450395 310 ntBASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 AC090525.1-201ENST00000479116 478 ntBASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 AC111000.2-201ENST00000507775 550 ntBASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 EIF5A2P1-201ENST00000564027 460 ntBASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 AL627309.6-201ENST00000606857 840 ntBASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 RNU6-156P-201ENST00000621869 107 ntBASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 CR381653.2-201ENST00000624041 768 ntBASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
UPF3BQ9BZI7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 AP001350.1-201ENST00000601906 1524 ntBASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 AL672167.1-206ENST00000356293 943 ntBASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 RNU1-112P-201ENST00000364401 164 ntBASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 MIR1250-201ENST00000408098 113 ntBASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 AC023128.2-201ENST00000420880 1223 ntBASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 TRIM60P18-201ENST00000441518 828 ntBASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 AL135938.1-201ENST00000443141 297 ntBASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 MTND3P6-201ENST00000485242 339 ntBASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 AC107398.1-201ENST00000486904 505 ntBASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 AC239860.2-201ENST00000525886 270 ntBASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 AL355836.1-201ENST00000555951 870 ntBASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 MIR4769-201ENST00000584126 77 ntBASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 ATP1B3P1-201ENST00000605365 821 ntBASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 AC090617.7-201ENST00000623952 126 ntBASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 ELF2P3-201ENST00000445099 1506 ntBASIC3.24□□□□□ -1.89
UPF3BQ9BZI7 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 RNU6-564P-201ENST00000410983 104 ntBASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 AC005517.2-201ENST00000424673 553 ntBASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 RPL23AP74-201ENST00000437246 471 ntBASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 ELOCP13-201ENST00000443934 329 ntBASIC3.23□□□□□ -1.89
UPF3BQ9BZI7 AL109933.2-201ENST00000452651 260 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms