Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.44□□□□□ -1.86
SCAPERQ9BY12 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.44□□□□□ -1.86
SCAPERQ9BY12 AP001004.1-201ENST00000582468 324 ntBASIC3.44□□□□□ -1.86
SCAPERQ9BY12 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.44□□□□□ -1.86
SCAPERQ9BY12 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.44□□□□□ -1.86
SCAPERQ9BY12 AC103710.2-201ENST00000609912 942 ntBASIC3.44□□□□□ -1.86
SCAPERQ9BY12 AC002076.2-201ENST00000617362 122 ntBASIC3.44□□□□□ -1.86
SCAPERQ9BY12 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SCAPERQ9BY12 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SCAPERQ9BY12 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SCAPERQ9BY12 AC022336.2-201ENST00000568966 2538 ntBASIC3.44□□□□□ -1.86
SCAPERQ9BY12 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
SCAPERQ9BY12 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.44□□□□□ -1.86
SCAPERQ9BY12 Y_RNA.164-201ENST00000363709 102 ntBASIC3.44□□□□□ -1.86
SCAPERQ9BY12 SNORA80E-201ENST00000384744 137 ntBASIC3.44□□□□□ -1.86
SCAPERQ9BY12 MIR221-201ENST00000385135 110 ntBASIC3.44□□□□□ -1.86
SCAPERQ9BY12 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.44□□□□□ -1.86
SCAPERQ9BY12 ATG3P1-201ENST00000419507 911 ntBASIC3.44□□□□□ -1.86
SCAPERQ9BY12 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.44□□□□□ -1.86
SCAPERQ9BY12 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.44□□□□□ -1.86
SCAPERQ9BY12 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.44□□□□□ -1.86
SCAPERQ9BY12 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
SCAPERQ9BY12 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.44□□□□□ -1.86
SCAPERQ9BY12 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.44□□□□□ -1.86
SCAPERQ9BY12 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.44□□□□□ -1.86
SCAPERQ9BY12 MIR219B-201ENST00000637023 88 ntBASIC3.44□□□□□ -1.86
SCAPERQ9BY12 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SCAPERQ9BY12 MIR142-201ENST00000384835 87 ntBASIC3.43□□□□□ -1.86
SCAPERQ9BY12 MTND4P13-201ENST00000402078 1023 ntBASIC3.43□□□□□ -1.86
SCAPERQ9BY12 AC092427.1-202ENST00000430569 476 ntBASIC3.43□□□□□ -1.86
SCAPERQ9BY12 RPS15AP28-201ENST00000435088 386 ntBASIC3.43□□□□□ -1.86
SCAPERQ9BY12 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SCAPERQ9BY12 AC007677.1-201ENST00000445757 515 ntBASIC3.43□□□□□ -1.86
SCAPERQ9BY12 RPL23AP70-201ENST00000483361 460 ntBASIC3.43□□□□□ -1.86
SCAPERQ9BY12 RNU6-295P-201ENST00000516901 104 ntBASIC3.43□□□□□ -1.86
SCAPERQ9BY12 MIR6845-201ENST00000613182 61 ntBASIC3.43□□□□□ -1.86
SCAPERQ9BY12 MTND5P29-201ENST00000458676 1807 ntBASIC3.43□□□□□ -1.86
SCAPERQ9BY12 AC011460.1-201ENST00000636268 1834 ntBASIC3.43□□□□□ -1.86
SCAPERQ9BY12 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SCAPERQ9BY12 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SCAPERQ9BY12 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SCAPERQ9BY12 MAPK10-322ENST00000641485 4530 ntBASIC3.42□□□□□ -1.86
SCAPERQ9BY12 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SCAPERQ9BY12 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.42□□□□□ -1.86
SCAPERQ9BY12 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SCAPERQ9BY12 PTP4A1P7-201ENST00000423476 514 ntBASIC3.42□□□□□ -1.86
SCAPERQ9BY12 SNRPGP3-201ENST00000469405 227 ntBASIC3.42□□□□□ -1.86
SCAPERQ9BY12 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.42□□□□□ -1.86
SCAPERQ9BY12 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SCAPERQ9BY12 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.42□□□□□ -1.86
SCAPERQ9BY12 FAM35CP-201ENST00000554755 2470 ntBASIC3.42□□□□□ -1.86
SCAPERQ9BY12 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SCAPERQ9BY12 Y_RNA.226-201ENST00000364337 114 ntBASIC3.41□□□□□ -1.86
SCAPERQ9BY12 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.41□□□□□ -1.86
SCAPERQ9BY12 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.41□□□□□ -1.86
SCAPERQ9BY12 AC117522.2-201ENST00000510049 657 ntBASIC3.41□□□□□ -1.86
SCAPERQ9BY12 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.41□□□□□ -1.86
SCAPERQ9BY12 HMGB1P41-201ENST00000520234 440 ntBASIC3.41□□□□□ -1.86
SCAPERQ9BY12 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
SCAPERQ9BY12 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.41□□□□□ -1.86
SCAPERQ9BY12 AC135628.1-201ENST00000568867 534 ntBASIC3.41□□□□□ -1.86
SCAPERQ9BY12 MIR3670-2-201ENST00000582974 65 ntBASIC3.41□□□□□ -1.86
SCAPERQ9BY12 MIR3670-1-201ENST00000584160 65 ntBASIC3.41□□□□□ -1.86
SCAPERQ9BY12 MIR3670-3-201ENST00000584855 65 ntBASIC3.41□□□□□ -1.86
SCAPERQ9BY12 AC083899.3-201ENST00000603413 594 ntBASIC3.41□□□□□ -1.86
SCAPERQ9BY12 MIR3670-4-201ENST00000612260 65 ntBASIC3.41□□□□□ -1.86
SCAPERQ9BY12 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
SCAPERQ9BY12 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SCAPERQ9BY12 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
SCAPERQ9BY12 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
SCAPERQ9BY12 AC080128.1-201ENST00000474389 1917 ntBASIC3.4□□□□□ -1.86
SCAPERQ9BY12 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
SCAPERQ9BY12 Y_RNA.140-201ENST00000363474 103 ntBASIC3.4□□□□□ -1.87
SCAPERQ9BY12 MIR591-201ENST00000385290 95 ntBASIC3.4□□□□□ -1.87
SCAPERQ9BY12 RNA5SP213-201ENST00000391031 106 ntBASIC3.4□□□□□ -1.87
SCAPERQ9BY12 SNORA26.9-201ENST00000391322 122 ntBASIC3.4□□□□□ -1.87
SCAPERQ9BY12 FAT1P1-201ENST00000406588 507 ntBASIC3.4□□□□□ -1.87
SCAPERQ9BY12 MTATP6P11-201ENST00000428071 670 ntBASIC3.4□□□□□ -1.87
SCAPERQ9BY12 UBE2V2P1-201ENST00000434717 398 ntBASIC3.4□□□□□ -1.87
SCAPERQ9BY12 AC006483.1-201ENST00000487308 313 ntBASIC3.4□□□□□ -1.87
SCAPERQ9BY12 TMEM248P1-201ENST00000510579 951 ntBASIC3.4□□□□□ -1.87
SCAPERQ9BY12 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.4□□□□□ -1.87
SCAPERQ9BY12 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.4□□□□□ -1.87
SCAPERQ9BY12 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.4□□□□□ -1.87
SCAPERQ9BY12 AP004247.3-201ENST00000608682 624 ntBASIC3.4□□□□□ -1.87
SCAPERQ9BY12 MIR7111-201ENST00000619751 72 ntBASIC3.4□□□□□ -1.87
SCAPERQ9BY12 MIR6766-201ENST00000622641 72 ntBASIC3.4□□□□□ -1.87
SCAPERQ9BY12 ADAM3A-203ENST00000461344 2157 ntBASIC3.4□□□□□ -1.87
SCAPERQ9BY12 AC009487.4-201ENST00000624969 3585 ntBASIC3.4□□□□□ -1.87
SCAPERQ9BY12 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SCAPERQ9BY12 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
SCAPERQ9BY12 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
SCAPERQ9BY12 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.39□□□□□ -1.87
SCAPERQ9BY12 AC098826.1-201ENST00000433943 471 ntBASIC3.39□□□□□ -1.87
SCAPERQ9BY12 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.39□□□□□ -1.87
SCAPERQ9BY12 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.39□□□□□ -1.87
SCAPERQ9BY12 MTND4LP22-201ENST00000508209 276 ntBASIC3.39□□□□□ -1.87
SCAPERQ9BY12 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.39□□□□□ -1.87
SCAPERQ9BY12 CCNHP1-201ENST00000513311 678 ntBASIC3.39□□□□□ -1.87
SCAPERQ9BY12 AC021733.2-201ENST00000518830 497 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms