Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.51□□□□□ -1.69
NDC1Q9BTX1 RN7SL652P-201ENST00000577769 300 ntBASIC4.51□□□□□ -1.69
NDC1Q9BTX1 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.51□□□□□ -1.69
NDC1Q9BTX1 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.51□□□□□ -1.69
NDC1Q9BTX1 AC068790.4-201ENST00000602474 263 ntBASIC4.51□□□□□ -1.69
NDC1Q9BTX1 AC007566.2-201ENST00000603642 413 ntBASIC4.51□□□□□ -1.69
NDC1Q9BTX1 AC025588.3-201ENST00000604182 274 ntBASIC4.51□□□□□ -1.69
NDC1Q9BTX1 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.51□□□□□ -1.69
NDC1Q9BTX1 AL596245.1-201ENST00000618994 362 ntBASIC4.51□□□□□ -1.69
NDC1Q9BTX1 AC024614.3-201ENST00000637860 256 ntBASIC4.51□□□□□ -1.69
NDC1Q9BTX1 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NDC1Q9BTX1 NUP58P1-201ENST00000502546 1738 ntBASIC4.51□□□□□ -1.69
NDC1Q9BTX1 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.51□□□□□ -1.69
NDC1Q9BTX1 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.51□□□□□ -1.69
NDC1Q9BTX1 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
NDC1Q9BTX1 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
NDC1Q9BTX1 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
NDC1Q9BTX1 ZFRP1-201ENST00000457579 2970 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 LINC00622-201ENST00000562811 1570 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 OR52B1P-201ENST00000316506 909 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 RNU4-73P-201ENST00000363164 141 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 RNU1-39P-201ENST00000383897 165 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 RNU6-1207P-201ENST00000384343 107 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 Y_RNA.529-201ENST00000384586 119 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 AC068050.1-201ENST00000394891 380 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 GLULP6-201ENST00000399502 913 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 MTATP6P18-201ENST00000417994 673 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 AC069213.2-201ENST00000420238 366 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 AC019097.1-201ENST00000424783 735 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 AL136380.1-201ENST00000447970 162 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 AC022034.3-201ENST00000471393 478 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 RPL12P20-201ENST00000475538 479 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 RPL39P36-201ENST00000490784 156 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 NPM1P41-201ENST00000512920 831 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 RNU6-1153P-201ENST00000516760 105 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 AC005868.1-201ENST00000536421 331 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 AC093249.4-201ENST00000564755 259 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 AC034105.3-201ENST00000565294 442 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 CYCSP40-201ENST00000575927 294 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 MIR3167-201ENST00000579623 85 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 MIR3118-1-201ENST00000581787 76 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 AC209154.1-201ENST00000582156 337 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 MIR4512-201ENST00000583257 77 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 AL136363.1-201ENST00000605349 337 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 RMST_3.1-201ENST00000611651 109 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 AC006504.8-201ENST00000621046 635 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 YWHAEP7-203ENST00000622054 312 ntBASIC4.5□□□□□ -1.69
NDC1Q9BTX1 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NDC1Q9BTX1 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NDC1Q9BTX1 AC114546.3-201ENST00000623582 1734 ntBASIC4.49□□□□□ -1.69
NDC1Q9BTX1 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NDC1Q9BTX1 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.49□□□□□ -1.69
NDC1Q9BTX1 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NDC1Q9BTX1 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NDC1Q9BTX1 RNA5SP258-201ENST00000362750 119 ntBASIC4.49□□□□□ -1.69
NDC1Q9BTX1 RNU6-451P-201ENST00000362921 107 ntBASIC4.49□□□□□ -1.69
NDC1Q9BTX1 RNU6-97P-201ENST00000363387 104 ntBASIC4.49□□□□□ -1.69
NDC1Q9BTX1 Y_RNA.142-201ENST00000363491 102 ntBASIC4.49□□□□□ -1.69
NDC1Q9BTX1 RNU4-1-201ENST00000363925 141 ntBASIC4.49□□□□□ -1.69
NDC1Q9BTX1 Y_RNA.234-201ENST00000364409 97 ntBASIC4.49□□□□□ -1.69
NDC1Q9BTX1 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
NDC1Q9BTX1 RNU6-456P-201ENST00000384493 107 ntBASIC4.49□□□□□ -1.69
NDC1Q9BTX1 AL049697.2-201ENST00000403708 294 ntBASIC4.49□□□□□ -1.69
NDC1Q9BTX1 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.49□□□□□ -1.69
NDC1Q9BTX1 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.49□□□□□ -1.69
NDC1Q9BTX1 AC140479.3-201ENST00000418944 1126 ntBASIC4.49□□□□□ -1.69
NDC1Q9BTX1 SDCBPP3-201ENST00000419629 891 ntBASIC4.49□□□□□ -1.69
NDC1Q9BTX1 AL590609.2-201ENST00000421430 368 ntBASIC4.49□□□□□ -1.69
NDC1Q9BTX1 AC016712.1-201ENST00000431088 378 ntBASIC4.49□□□□□ -1.69
NDC1Q9BTX1 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NDC1Q9BTX1 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.49□□□□□ -1.69
NDC1Q9BTX1 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.49□□□□□ -1.69
NDC1Q9BTX1 USP9YP15-201ENST00000442391 422 ntBASIC4.49□□□□□ -1.69
NDC1Q9BTX1 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms