Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AP005264.7-201ENST00000625003 745 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 MIR3688-2-201ENST00000636963 87 ntBASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
LRFN3Q9BTN0 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AC004944.1-201ENST00000517807 3059 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AC006206.1-201ENST00000544842 3387 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AC027287.1-201ENST00000553115 1453 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AP001029.2-203ENST00000589795 4910 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 OR5P1P-201ENST00000299512 925 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 RNU6-97P-201ENST00000363387 104 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 RNU6-853P-201ENST00000364306 107 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 RNU6-343P-201ENST00000364709 104 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 XGY1-201ENST00000381172 446 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 SNORD51-201ENST00000384320 80 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 RNU6-809P-201ENST00000384461 107 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 RPL21P65-201ENST00000406094 466 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 OR2AH1P-201ENST00000425717 928 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AL356583.2-201ENST00000426536 280 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 MTCO2P11-201ENST00000431069 680 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AC236972.1-201ENST00000433225 199 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 RPL22P17-201ENST00000438729 315 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AC108734.1-201ENST00000439549 399 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 GDI2P2-201ENST00000445131 608 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AL590365.1-201ENST00000450788 243 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AP1S2P1-201ENST00000457344 379 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 RPS4XP10-201ENST00000465034 731 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 ST13P14-201ENST00000474095 734 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 RPS27AP1-201ENST00000475545 471 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AC105252.1-201ENST00000503089 286 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 ARL2BPP6-201ENST00000512757 439 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AC046134.1-201ENST00000514454 666 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 TRAV8-5-201ENST00000537369 341 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 MIR5697-201ENST00000578045 78 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 MIR5195-201ENST00000583555 115 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AC078795.3-201ENST00000602913 472 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AC112191.3-201ENST00000604371 277 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 RNA5SP108-201ENST00000605921 117 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AC104458.1-201ENST00000608243 463 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AC006329.2-201ENST00000611491 394 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AL121772.2-201ENST00000614331 297 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AC126177.8-201ENST00000618339 1015 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AP006248.2-201ENST00000623309 592 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 MUC2-202ENST00000613187 4845 ntBASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
LRFN3Q9BTN0 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LRFN3Q9BTN0 AC073136.1-201ENST00000449426 2884 ntBASIC4.63□□□□□ -1.67
LRFN3Q9BTN0 AC104260.2-201ENST00000623551 3497 ntBASIC4.63□□□□□ -1.67
LRFN3Q9BTN0 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.63□□□□□ -1.67
LRFN3Q9BTN0 AC083899.1-201ENST00000454465 3819 ntBASIC4.63□□□□□ -1.67
LRFN3Q9BTN0 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
LRFN3Q9BTN0 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LRFN3Q9BTN0 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LRFN3Q9BTN0 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LRFN3Q9BTN0 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.63□□□□□ -1.67
LRFN3Q9BTN0 FRG1BP-201ENST00000278882 761 ntBASIC4.63□□□□□ -1.67
LRFN3Q9BTN0 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.63□□□□□ -1.67
LRFN3Q9BTN0 Y_RNA.500-201ENST00000384466 111 ntBASIC4.63□□□□□ -1.67
LRFN3Q9BTN0 SNORD115.1-201ENST00000391109 76 ntBASIC4.63□□□□□ -1.67
LRFN3Q9BTN0 U3.29-201ENST00000391296 212 ntBASIC4.63□□□□□ -1.67
LRFN3Q9BTN0 RNA5SP56-201ENST00000410277 118 ntBASIC4.63□□□□□ -1.67
LRFN3Q9BTN0 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.63□□□□□ -1.67
LRFN3Q9BTN0 CKS1BP5-201ENST00000434172 273 ntBASIC4.63□□□□□ -1.67
LRFN3Q9BTN0 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.63□□□□□ -1.67
LRFN3Q9BTN0 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.63□□□□□ -1.67
LRFN3Q9BTN0 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.63□□□□□ -1.67
LRFN3Q9BTN0 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms