Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.59□□□□□ -1.83
CPNE1Q99829 AC239860.2-201ENST00000525886 270 ntBASIC3.59□□□□□ -1.83
CPNE1Q99829 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.59□□□□□ -1.83
CPNE1Q99829 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.59□□□□□ -1.83
CPNE1Q99829 AC009094.1-201ENST00000564443 426 ntBASIC3.59□□□□□ -1.83
CPNE1Q99829 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.59□□□□□ -1.83
CPNE1Q99829 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.59□□□□□ -1.83
CPNE1Q99829 MIR6875-201ENST00000617506 72 ntBASIC3.59□□□□□ -1.83
CPNE1Q99829 RNA5SP196-201ENST00000625967 102 ntBASIC3.59□□□□□ -1.83
CPNE1Q99829 AP001486.2-201ENST00000561652 5113 ntBASIC3.59□□□□□ -1.83
CPNE1Q99829 PRO1804-201ENST00000623780 2050 ntBASIC3.59□□□□□ -1.83
CPNE1Q99829 AL022578.1-201ENST00000439330 1433 ntBASIC3.59□□□□□ -1.84
CPNE1Q99829 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CPNE1Q99829 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
CPNE1Q99829 AC004925.1-201ENST00000624256 2706 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.58□□□□□ -1.84
CPNE1Q99829 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CPNE1Q99829 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.58□□□□□ -1.84
CPNE1Q99829 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.58□□□□□ -1.84
CPNE1Q99829 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
CPNE1Q99829 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CPNE1Q99829 OR5H2-201ENST00000355273 945 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 RNU6-28P-201ENST00000362378 107 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 RNU6-952P-201ENST00000391164 108 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 RPL7P60-201ENST00000397636 735 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.58□□□□□ -1.84
CPNE1Q99829 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.58□□□□□ -1.84
CPNE1Q99829 PTP4A1P5-201ENST00000420305 455 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 MTND4LP10-201ENST00000435146 291 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 MUPP-201ENST00000438111 566 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 AL354941.1-201ENST00000438600 464 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 SDCBPP1-201ENST00000440192 890 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.58□□□□□ -1.84
CPNE1Q99829 AC104978.1-201ENST00000449387 391 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 MRPS31P2-201ENST00000451581 518 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 RPL23AP35-201ENST00000451906 501 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.58□□□□□ -1.84
CPNE1Q99829 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.58□□□□□ -1.84
CPNE1Q99829 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.58□□□□□ -1.84
CPNE1Q99829 RPS4XP10-201ENST00000465034 731 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 RN7SL594P-201ENST00000470590 287 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 RPL31P50-201ENST00000471002 296 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 AC004263.1-201ENST00000479327 332 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 VN1R105P-201ENST00000486595 910 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 AC023424.2-201ENST00000493479 777 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 AC020893.1-201ENST00000502452 580 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.58□□□□□ -1.84
CPNE1Q99829 HMGB1P22-201ENST00000505315 124 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.58□□□□□ -1.84
CPNE1Q99829 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.58□□□□□ -1.84
CPNE1Q99829 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CPNE1Q99829 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.58□□□□□ -1.84
CPNE1Q99829 RNU2-58P-201ENST00000516403 183 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 SNORA31.20-201ENST00000517111 133 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.58□□□□□ -1.84
CPNE1Q99829 MED28P5-201ENST00000528254 438 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 AC026333.2-201ENST00000542164 106 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 UBE2NP1-201ENST00000545592 458 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.58□□□□□ -1.84
CPNE1Q99829 AC126177.3-201ENST00000551839 688 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 SETP7-201ENST00000552169 453 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.58□□□□□ -1.84
CPNE1Q99829 DUXAP6-201ENST00000553858 601 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.58□□□□□ -1.84
CPNE1Q99829 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.58□□□□□ -1.84
CPNE1Q99829 MIR4700-201ENST00000578311 74 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 MIR4286-201ENST00000580651 93 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.58□□□□□ -1.84
CPNE1Q99829 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.58□□□□□ -1.84
CPNE1Q99829 AC006539.2-201ENST00000601729 572 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 XIAPP1-201ENST00000603162 600 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 AL590392.1-201ENST00000604960 446 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 AL365503.1-201ENST00000605247 905 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 AL390208.1-201ENST00000605885 644 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.58□□□□□ -1.84
CPNE1Q99829 AC009464.1-201ENST00000615731 469 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 AL445264.1-201ENST00000621719 171 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CPNE1Q99829 AC112200.1-201ENST00000625015 234 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 AC103706.2-201ENST00000638080 240 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.58□□□□□ -1.84
CPNE1Q99829 ZNF542P-204ENST00000482727 1305 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CPNE1Q99829 AP001350.1-201ENST00000601906 1524 ntBASIC3.58□□□□□ -1.84
CPNE1Q99829 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
CPNE1Q99829 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CPNE1Q99829 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.57□□□□□ -1.84
CPNE1Q99829 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CPNE1Q99829 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CPNE1Q99829 SNORA51.2-201ENST00000364595 132 ntBASIC3.57□□□□□ -1.84
CPNE1Q99829 SNORD6-201ENST00000365444 73 ntBASIC3.57□□□□□ -1.84
CPNE1Q99829 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.57□□□□□ -1.84
CPNE1Q99829 RNU6-628P-201ENST00000410675 107 ntBASIC3.57□□□□□ -1.84
CPNE1Q99829 PIGPP2-201ENST00000411569 458 ntBASIC3.57□□□□□ -1.84
CPNE1Q99829 AC099677.1-201ENST00000420575 175 ntBASIC3.57□□□□□ -1.84
CPNE1Q99829 AC005005.2-201ENST00000420779 380 ntBASIC3.57□□□□□ -1.84
CPNE1Q99829 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.57□□□□□ -1.84
CPNE1Q99829 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.57□□□□□ -1.84
CPNE1Q99829 AL022400.1-201ENST00000423946 935 ntBASIC3.57□□□□□ -1.84
CPNE1Q99829 SGO1P2-201ENST00000429458 1589 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms