Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3□□□□□ -1.93
ABCA3Q99758 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3□□□□□ -1.93
ABCA3Q99758 CEACAMP4-201ENST00000457676 421 ntBASIC3□□□□□ -1.93
ABCA3Q99758 RNA5SP309-201ENST00000516670 106 ntBASIC3□□□□□ -1.93
ABCA3Q99758 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3□□□□□ -1.93
ABCA3Q99758 AC011494.1-201ENST00000596454 237 ntBASIC3□□□□□ -1.93
ABCA3Q99758 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3□□□□□ -1.93
ABCA3Q99758 AL356266.1-201ENST00000623311 483 ntBASIC3□□□□□ -1.93
ABCA3Q99758 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
ABCA3Q99758 AL445437.1-201ENST00000623157 3087 ntBASIC3□□□□□ -1.93
ABCA3Q99758 MTND5P29-201ENST00000458676 1807 ntBASIC3□□□□□ -1.93
ABCA3Q99758 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ABCA3Q99758 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3□□□□□ -1.93
ABCA3Q99758 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3□□□□□ -1.93
ABCA3Q99758 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3□□□□□ -1.93
ABCA3Q99758 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
ABCA3Q99758 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3□□□□□ -1.93
ABCA3Q99758 RNU1-17P-201ENST00000363022 152 ntBASIC2.99□□□□□ -1.93
ABCA3Q99758 ARF4P2-201ENST00000430209 526 ntBASIC2.99□□□□□ -1.93
ABCA3Q99758 RPS24P8-201ENST00000431490 402 ntBASIC2.99□□□□□ -1.93
ABCA3Q99758 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.99□□□□□ -1.93
ABCA3Q99758 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.99□□□□□ -1.93
ABCA3Q99758 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.99□□□□□ -1.93
ABCA3Q99758 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.99□□□□□ -1.93
ABCA3Q99758 AL022099.1-201ENST00000604551 712 ntBASIC2.99□□□□□ -1.93
ABCA3Q99758 AL159169.2-201ENST00000610061 1269 ntBASIC2.99□□□□□ -1.93
ABCA3Q99758 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.99□□□□□ -1.93
ABCA3Q99758 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
ABCA3Q99758 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
ABCA3Q99758 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ABCA3Q99758 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.99□□□□□ -1.93
ABCA3Q99758 BX005019.1-201ENST00000561881 1810 ntBASIC2.99□□□□□ -1.93
ABCA3Q99758 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
ABCA3Q99758 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.99□□□□□ -1.93
ABCA3Q99758 MIR518E-201ENST00000385252 88 ntBASIC2.99□□□□□ -1.93
ABCA3Q99758 AC091179.1-201ENST00000461606 579 ntBASIC2.99□□□□□ -1.93
ABCA3Q99758 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
ABCA3Q99758 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.99□□□□□ -1.93
ABCA3Q99758 RNU6-295P-201ENST00000516901 104 ntBASIC2.99□□□□□ -1.93
ABCA3Q99758 GNAI2P1-201ENST00000541815 315 ntBASIC2.99□□□□□ -1.93
ABCA3Q99758 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.99□□□□□ -1.93
ABCA3Q99758 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.99□□□□□ -1.93
ABCA3Q99758 AC116447.1-201ENST00000613153 453 ntBASIC2.99□□□□□ -1.93
ABCA3Q99758 C2orf27A-204ENST00000623058 969 ntBASIC2.99□□□□□ -1.93
ABCA3Q99758 AL359893.1-201ENST00000447628 1580 ntBASIC2.99□□□□□ -1.93
ABCA3Q99758 AC092326.2-201ENST00000624772 1561 ntBASIC2.99□□□□□ -1.93
ABCA3Q99758 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.98□□□□□ -1.93
ABCA3Q99758 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
ABCA3Q99758 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.98□□□□□ -1.93
ABCA3Q99758 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.98□□□□□ -1.93
ABCA3Q99758 AC092427.1-202ENST00000430569 476 ntBASIC2.98□□□□□ -1.93
ABCA3Q99758 RPS15AP28-201ENST00000435088 386 ntBASIC2.98□□□□□ -1.93
ABCA3Q99758 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.98□□□□□ -1.93
ABCA3Q99758 HMGB1P48-201ENST00000446155 598 ntBASIC2.98□□□□□ -1.93
ABCA3Q99758 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.98□□□□□ -1.93
ABCA3Q99758 HSPE1P22-201ENST00000456856 327 ntBASIC2.98□□□□□ -1.93
ABCA3Q99758 RNU6-1053P-201ENST00000515930 101 ntBASIC2.98□□□□□ -1.93
ABCA3Q99758 SCARNA16.3-201ENST00000516595 184 ntBASIC2.98□□□□□ -1.93
ABCA3Q99758 OR4U1P-201ENST00000554958 912 ntBASIC2.98□□□□□ -1.93
ABCA3Q99758 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.98□□□□□ -1.93
ABCA3Q99758 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.98□□□□□ -1.93
ABCA3Q99758 AC012182.1-201ENST00000570133 895 ntBASIC2.98□□□□□ -1.93
ABCA3Q99758 snoU13.31-201ENST00000607291 104 ntBASIC2.98□□□□□ -1.93
ABCA3Q99758 AC009831.4-201ENST00000620744 325 ntBASIC2.98□□□□□ -1.93
ABCA3Q99758 U6.98-201ENST00000637157 84 ntBASIC2.98□□□□□ -1.93
ABCA3Q99758 AC011460.1-201ENST00000636268 1834 ntBASIC2.97□□□□□ -1.93
ABCA3Q99758 AC009487.2-201ENST00000420969 6821 ntBASIC2.97□□□□□ -1.93
ABCA3Q99758 AC008432.1-201ENST00000615912 1320 ntBASIC2.97□□□□□ -1.93
ABCA3Q99758 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
ABCA3Q99758 RNA5SP213-201ENST00000391031 106 ntBASIC2.97□□□□□ -1.93
ABCA3Q99758 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
ABCA3Q99758 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.97□□□□□ -1.93
ABCA3Q99758 AL353093.1-201ENST00000441292 436 ntBASIC2.97□□□□□ -1.93
ABCA3Q99758 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.97□□□□□ -1.93
ABCA3Q99758 COX6CP2-201ENST00000444980 225 ntBASIC2.97□□□□□ -1.93
ABCA3Q99758 AL035551.1-201ENST00000446931 348 ntBASIC2.97□□□□□ -1.93
ABCA3Q99758 RNU7-157P-201ENST00000459600 66 ntBASIC2.97□□□□□ -1.93
ABCA3Q99758 SCARNA17.1-201ENST00000516211 143 ntBASIC2.97□□□□□ -1.93
ABCA3Q99758 RNA5SP76-201ENST00000516277 87 ntBASIC2.97□□□□□ -1.93
ABCA3Q99758 SCARNA17.2-201ENST00000516334 143 ntBASIC2.97□□□□□ -1.93
ABCA3Q99758 AC012531.5-201ENST00000611375 151 ntBASIC2.97□□□□□ -1.93
ABCA3Q99758 AL450489.1-201ENST00000612071 468 ntBASIC2.97□□□□□ -1.93
ABCA3Q99758 SCARNA17.4-201ENST00000614296 143 ntBASIC2.97□□□□□ -1.93
ABCA3Q99758 AL110115.1-201ENST00000614396 364 ntBASIC2.97□□□□□ -1.93
ABCA3Q99758 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.97□□□□□ -1.93
ABCA3Q99758 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
ABCA3Q99758 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
ABCA3Q99758 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.97□□□□□ -1.93
ABCA3Q99758 AP001148.1-201ENST00000624124 2359 ntBASIC2.96□□□□□ -1.93
ABCA3Q99758 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.96□□□□□ -1.93
ABCA3Q99758 MIR221-201ENST00000385135 110 ntBASIC2.96□□□□□ -1.93
ABCA3Q99758 NDUFA5P4-201ENST00000436704 385 ntBASIC2.96□□□□□ -1.93
ABCA3Q99758 AL138787.1-202ENST00000437804 898 ntBASIC2.96□□□□□ -1.93
ABCA3Q99758 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.96□□□□□ -1.93
ABCA3Q99758 RPL9P33-201ENST00000484311 566 ntBASIC2.96□□□□□ -1.93
ABCA3Q99758 AC117522.2-201ENST00000510049 657 ntBASIC2.96□□□□□ -1.93
ABCA3Q99758 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
ABCA3Q99758 BX664608.1-201ENST00000610519 487 ntBASIC2.96□□□□□ -1.93
ABCA3Q99758 MIR219B-201ENST00000637023 88 ntBASIC2.96□□□□□ -1.93
ABCA3Q99758 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms